Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0331 ATGGAGAAGATAGAAGAAGAGGTAGCAAAAGTGGTTGAAGAAGCAAAAGATATTGAAGACTCAGTATCAGTTCATATCTCAAAAACCATAAGCGATGAACAAACACTACGCCAACGTGCTCTTACTCTTCATTCCAAAATCCATTCACTTCGTTCTTCCCTTTATTCTCTTCTCCCCAACAACACCACTTTAGCTGAAAAGTTGGATGAAGATTTGGAAAGAGCGAGATGCATCATTGTTGATGGTGATGCTGCTACTCTTCTTCCTGCACATGCACAAGGAAATTTTTTGAGGATGTTTATTGGACCTATTAATGTGCGTGCTTCCAGAAAAGATGTTCAACTCAAGGTTAAAGATGAATACAACAGTTACAGGGATAGAACTGCCTTGTTATTCCTCCTTTTTCCGGCATCACTGCTTATTCTACGATCTTGGGTTTGGGATGGATGCTTGCCAGCTTTCCCCTTTCAGATTTACCTGGCATGGCTGCTATTCCTTTACACTGGTTTGGCATTGCGAGAGAACATATTGAGAGTCAATGGAAGTGATATCCGTCCATGGTGGATATATCATCATTATTGTGCTATGGTGATGGCCCTTGTGAGTCTCACCTGTGGAATTAAAGGACAACCAAATTGTGCAACAAAGCAGAGAGGTGTAGAACTTTTCCTACAGTGGGCTATGATGCAAGGAGTTGCAATGCTTTTGCAAAATCGATATCAACGTCAGAGACTCTATACTCGTATTGCGTTAGGAAAGGCTAAGAGAATGGATGTTGTGTGGGGAGAAACAGCTGGTGTGGATGGCCAACTCTGGTTACTGTGTCCTATACTTTTCATTTTGCAGGGGTTCGAAGCTTACGTTGGAATATTGTTGCTCAAGACTGCATTTGTCGGGGTTGTTTCGGAGTGGCAGGTCATATTTTGTGGTGTCCTTTTGGTCTTGATGGCTGTTGGGAACTTCACAAATACAGTACAGACTCTAATGGTAAAGTCAAGATTTAAGGCAAAGATGAGAAAAAGCAAGAGTAAGCAGAGACTGAAATAA 1047 0.4164 MEKIEEEVAKVVEEAKDIEDSVSVHISKTISDEQTLRQRALTLHSKIHSLRSSLYSLLPNNTTLAEKLDEDLERARCIIVDGDAATLLPAHAQGNFLRMFIGPINVRASRKDVQLKVKDEYNSYRDRTALLFLLFPASLLILRSWVWDGCLPAFPFQIYLAWLLFLYTGLALRENILRVNGSDIRPWWIYHHYCAMVMALVSLTCGIKGQPNCATKQRGVELFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLWLLCPILFILQGFEAYVGILLLKTAFVGVVSEWQVIFCGVLLVLMAVGNFTNTVQTLMVKSRFKAKMRKSKSKQRLK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0331 348 PANTHER TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA 3 347 IPR012926 GO:0016021
Lal12g0331 348 PANTHER TMPIT-LIKE PROTEIN 3 347 - -
Lal12g0331 348 Pfam TMPIT-like protein 3 334 IPR012926 GO:0016021
Lal12g0331 348 Coils Coil 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0331 Lal-Chr12 2368040 2371368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0331 - - adu:107467650 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0331 12 2368040 2371368 Lal13g0313 13 1955336 1963552 LSH
Lal12g0331 12 2368040 2371368 Lal24g0255 24 1812795 1817779 LSH