Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal12g0282 | ATGGTTCGCCGCAGCAAGTGGCGATGGAACGCTCCACGCACCGGCGGCGTCGAAACCATTCCCATCGTTACTGTTGAGAACGGTGACGGTTCGTGTTCAGAAGGGTTAGAAACTAATGAAGATAATTCAGGAGGAGTAAGTGATTATTCCGATCAAACTAAAGTTCGGAAAAAGAACCCATTCGGAAAGAGTAACGAGGAGAGTTTGAAGAATCATGGGTCCAAACATAACCAAGAAGGAAAAAAAGATAGTGTTTTGAATAAGCGCGGTAGAAAAAGAAAAATCTTTGACAAAGATGAAGCTAGTGATTCAATGGCAGAAGATCAAGCTAATGGGGAATCTCAAAACCCTTCAGAAAGTTCCATTCAGAGACGTACCTTAAGAAATCTTCCTAGACCCAGTAATAAACAGGATATGCCAAAATTGAAGAGAAGCGTTAAATTTACAGAAGAAGAATGCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGCGAGGTTGTGAGGTGCACACTTTGTAAGCGCAAGAGATATTGCTTGTCATGCTTGCGCAAATGGTATCCTGAATGGAAATATGATGATGTTGCTGAGGCATGCCCTGTGTGCCGTGGCAATTGCAATTGCATAGCATGCATGCGGTCTTATACACATTTTGAGAAAATGAAGAGAGATGTGTGTAAGAAGAGGTATGAAGGTGATGATGATAATCTCTCTAAGTATGTAATGTTGTGGCTCCTTCCATATGTAAGACGATTGAATGAAGAACAGATGTCTGAGTTGGGGATAGAAGCTAAGAGACAAGGGCTCTCACTCTCAGAGCTTAATATTGAAAAGGCAGAATACTCACGGAAACATTCATATTATTTAGTTGCTGACTTAATGCTCTTTTGTAGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTACAAAATGTTCTTTTCATCTTTGTCTCACCTGTTGCCATGAGCTTCGTGATGGACAGCTTCTAGGTGGTGCAGATCCAGTTGAGTTGGAGTTCATCAAATGTAGTCTCGAGTATTTGCATGGTGGAAAAGAAAAGGAAAAGGAGCCTGAGATACATGAATCAGCTGCTGATGCTGAGCCTGACATTCGTGGATGGTCAAGATCTGGGTGGCATGCCGAAGGTGATGGTAGGATTTCCTGTCCAAAGATCAACGATGAGTGCTGCCATGGTTTTCTTGAATTGAAAAGCATATTTGGCCAGGCTTTTGTTTCAGAGTTAGTATATAAGGCAGAAGAACTAGCAAATGCATGTACACTTCAAAATGCAATTGAGACTCCTGACAACTTTTGTTCTTGTTTAAAGATCAGTAGAAACACATCTGTTAGAAATAATATAAGGAAGGCAGCTTCTCGTGAAGATTCCAGCGACAACTGGTTATACTGTCCTAGGGCTGTGGATTTACAACCGGTGGATTTAAAGCATTTTCAATGCCACTGGATCAAAGGGGAGCCCGTCATTGTCAGCAATGTGCTTGAATGTACATCAGGTTTGAGCTGGGAGCCACTAGTGATGTGGCGTGCATTCCGTAAAATTAGTACTACCAAGTATGGTAAACATTTGGATGTGAAGGTCTTGGATTGCTTAGATTTGTGCGAGAAAGATATCAATATGCATCAATTCTTTATTGGGTATACAAATGGTCGTTATGATTGGCTTAATTGGCCTCAGATACTGAAATTGAAAGATTGGCCTCCGTCCAATTTATTTGTGGAACATTTACCTCGTCATTGTGCCGAGTTCTTATCTTCCTTGCCCTTTAAAGGATATACAGATCCTCTCGGAGGTGCTCTTAACCTCACTGCCCTTAACTCCTTTGATCTTAAATATTCAAAGGCAGACATGGGGCCAAATACATTTATTGCTTATGGAGTTAGTCAGGAGCTTGGACGTGGTGACGCTGTGACTAAGCTTCACTGTAACATGTCTGATGCAGTAAATGTGTTGGTTCATATTGCCAATGTGGAATTGTGGCCTAAACATCTCACTGCCATTGATAAGTTGAAGCTAAAGCACCTCGAGCAAGACAAGAGGGAGCTACTTCAAGATGATCAGGAGGGAGAAAGTAATGATGGGTTGCGTAGTAGTTCATCCTCTACTGTAGATGGTCTTTCATATGGGGAGGATGCTTCAGATGGTGCTCTCTGGGATATTTTTCGAAGACAGGATGTACCTAAATTGCAGGAATATCTAAAGAAGCATTTTAGAGAGTTTAGGCATGTCCACTGCCGTCCTGTAAAGCAGGTTATTCATCTCATCCATGACCAGACTATGTATTTGACGCTGGAGCATAAGAGGAAGCTAAAGGAGGAGTATCGGATTGAGCCCTGGACTTTTATTCAGAAGTTGGGAGATGCTGTTTTAATTCCAGCGGGCTGCCCTTACCAAGTCAGAAATCTTAAGTCATGCATCATGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTTTCCGTTTGACAGAGGAGTTTCGCACACTTCCAATAAATCACATGTTTTCGAAGGACAGATTGGAGGTGAAGAAAATGACAATACTTGCTATGCATAACATGGTTAAAAAAATGGAGAAAGCAAGTGTAGCGAATGCGAGCTTCAAGCCTTATGTGCATCCATTGCGAGATGCTGATCTTGCACTTTCAACTTCGAAAGAGCAAGAGAAGAAGGTTCCAACCCCTGCGGCAGTTTATGAAACTTTTGAGCAGCCCGATCTTTCTTCAAAGGAAAGTAAATCTTTTGTCACCCCCTCTGCTTCCAACCACTCCTTTCTCAATATCGATGTTGCTGAGGATGAAGCCATACAATCTATTCAAGCTCCTGAGGCTGTTGAAACATCTTCTGCCTCCCTTGTCCAAACTGCCATAAAAAAGGGGCATATGGTTCCTCCAGCTCCTCTATGGGACATGGTTTATGCAGCTATGGATGAATCCCTTCAATTAGAGCCTACTATCAAAGCTCTGTCAGATGATGCTGCTGGCCTCGCTCCTCATTCCCCTTCAGAAAGAACTGAAAATCCTATTGTTCCTGGATATGATCCATTGGCAGAGCTGGACCGCATGCTCTCAAGCAGCCAAAAACATTCCTCTTTGTCTGCAAAGTCATTTACCTGCACTGGAGAAGACTCTAGTGAATTCAAAGTGGTCAAACTCCTCGAATACCTTGAGTCAACAATCTCTTGCCCGCTCAACCAGTTAGCTACTGACAAGAGCCTCCAGGAGCGCCTCTACTCTCTCCTTGGCCAATTGAGGAAGCATCCTGCCAGCCTTCCTTCATCGCTTCGACAATTGCCCATCCTTATGAAGGCATCTCTTGGAGACCTAGTTGTTCAGTATCCAGCACTTCGAAGTACCATTGAGTCTCAAGAAAGGAGACTGAAAGATAAAGAGGAATATTCCAAACTGTTGGTCAAAACTAAGAATCGTCAAATTCATCTTGATACCAACATCAACAAAGGCATTTTCGATGTCTCGACTCTGGACAAGCAAATTGCTAACTTTGAACAAAAGCTCATTGAAATGAAGGCCCAGAGAGAAAAGATCCACATCTGCCTTGTCAAACATGAGGGAGAGAAGAAGAAGCTATTGGAAACTGCTGGTGTCTGGGTGGAAGAAACAAGAAGAATTATGTCGGCCATCAACGAGGCCACCGAGGACTATGATGAAGCCCTTTCGATTGAAGCAATCTATGCTCAGATGTGGGAAGGCTTCAAAAAAAACCTGGCTGATGTGAATTCTGCTTGA | 3777 | 0.426 | MVRRSKWRWNAPRTGGVETIPIVTVENGDGSCSEGLETNEDNSGGVSDYSDQTKVRKKNPFGKSNEESLKNHGSKHNQEGKKDSVLNKRGRKRKIFDKDEASDSMAEDQANGESQNPSESSIQRRTLRNLPRPSNKQDMPKLKRSVKFTEEECLMCHQCQRNDKGEVVRCTLCKRKRYCLSCLRKWYPEWKYDDVAEACPVCRGNCNCIACMRSYTHFEKMKRDVCKKRYEGDDDNLSKYVMLWLLPYVRRLNEEQMSELGIEAKRQGLSLSELNIEKAEYSRKHSYYLVADLMLFCSDNCKTSIFDYHRSCTKCSFHLCLTCCHELRDGQLLGGADPVELEFIKCSLEYLHGGKEKEKEPEIHESAADAEPDIRGWSRSGWHAEGDGRISCPKINDECCHGFLELKSIFGQAFVSELVYKAEELANACTLQNAIETPDNFCSCLKISRNTSVRNNIRKAASREDSSDNWLYCPRAVDLQPVDLKHFQCHWIKGEPVIVSNVLECTSGLSWEPLVMWRAFRKISTTKYGKHLDVKVLDCLDLCEKDINMHQFFIGYTNGRYDWLNWPQILKLKDWPPSNLFVEHLPRHCAEFLSSLPFKGYTDPLGGALNLTALNSFDLKYSKADMGPNTFIAYGVSQELGRGDAVTKLHCNMSDAVNVLVHIANVELWPKHLTAIDKLKLKHLEQDKRELLQDDQEGESNDGLRSSSSSTVDGLSYGEDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCRPVKQVIHLIHDQTMYLTLEHKRKLKEEYRIEPWTFIQKLGDAVLIPAGCPYQVRNLKSCIMVALDFVSPENVGECFRLTEEFRTLPINHMFSKDRLEVKKMTILAMHNMVKKMEKASVANASFKPYVHPLRDADLALSTSKEQEKKVPTPAAVYETFEQPDLSSKESKSFVTPSASNHSFLNIDVAEDEAIQSIQAPEAVETSSASLVQTAIKKGHMVPPAPLWDMVYAAMDESLQLEPTIKALSDDAAGLAPHSPSERTENPIVPGYDPLAELDRMLSSSQKHSSLSAKSFTCTGEDSSEFKVVKLLEYLESTISCPLNQLATDKSLQERLYSLLGQLRKHPASLPSSLRQLPILMKASLGDLVVQYPALRSTIESQERRLKDKEEYSKLLVKTKNRQIHLDTNINKGIFDVSTLDKQIANFEQKLIEMKAQREKIHICLVKHEGEKKKLLETAGVWVEETRRIMSAINEATEDYDEALSIEAIYAQMWEGFKKNLADVNSA | 1258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal12g0282 | 1258 | SUPERFAMILY | Clavaminate synthase-like | 480 | 856 | - | - | |
Lal12g0282 | 1258 | Gene3D | Cupin | 471 | 847 | - | - | |
Lal12g0282 | 1258 | Coils | Coil | 681 | 701 | - | - | |
Lal12g0282 | 1258 | ProSiteProfiles | JmjC domain profile. | 574 | 838 | IPR003347 | - | |
Lal12g0282 | 1258 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE | 697 | 872 | - | - | |
Lal12g0282 | 1258 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE | 36 | 692 | - | - | |
Lal12g0282 | 1258 | Pfam | JmjC domain, hydroxylase | 712 | 821 | IPR003347 | - | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 107 | 133 | - | - | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 692 | 717 | - | - | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 702 | 716 | - | - | |
Lal12g0282 | 1258 | ProSiteProfiles | Zinc finger RING-type profile. | 153 | 203 | IPR001841 | - | |
Lal12g0282 | 1258 | CDD | cupin_RmlC-like | 741 | 822 | - | - | |
Lal12g0282 | 1258 | PANTHER | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN | 36 | 692 | IPR045109 | GO:0032454|GO:0033169 | |
Lal12g0282 | 1258 | PANTHER | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN | 697 | 872 | IPR045109 | GO:0032454|GO:0033169 | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
Lal12g0282 | 1258 | Coils | Coil | 1168 | 1188 | - | - | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 25 | 142 | - | - | |
Lal12g0282 | 1258 | MobiDBLite | consensus disorder prediction | 51 | 105 | - | - | |
Lal12g0282 | 1258 | SMART | cupin_9 | 585 | 838 | IPR003347 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal12g0282 | Lal-Chr12 | 2014258 | 2025935 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Jumonji | Lal12g0282 | JmjC | 2.4e-11 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal12g0282 | K15601 | - | gmx:100780803 | 999.964 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal12g0282 | 12 | 2014258 | 2025935 | Lal13g0487 | 13 | 3159019 | 3161259 | LSH |