Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0279 ATGGCGGCCGGAGGAGATTTTACTGTTAAGATTAATGACATTGATCCCAGTGTTGTTTCTCCATCCATTTGGAGAGAATCAAGCTACGAATTCTGGAATGATGATGGCACCACTAGTTCTGATGAACGAGAAAATACAAACCAAGAGAGCTTCCATTTTCGCCATAAAGCTCAGTTGTCGCCGGAGGAGGATCCACCGTCGAGGCTCATTGGGAAGTTTTTGCATAAGCAGAAAGCTTCCGGTGACTTTTCGTTGGATATGGATTTGGAAATGGACGAGCTGCAGCATGATTCCGGCGACGGGAATCTCACGCCGGTTGTAGAGTCTCCGAAGGCGAACCACCACCGTATCTCAAGGGAAGTTAAGGTTTCGTTCGAGGAACCTGCTTCGAATGTGGTTGACGTAGCAAACGATCACGTCGTTAGAAGAAGGAGTAGCAAGGAATCGTCGTCGCTCGAAGAGTTTCAACGGCATGTGAAACGTGATGGTCATGGTGCATCTCTCTCTCCCTCCGGTGACGGTGAGGTTTTGAAGTGCACCTCAAATGCTTCATTTGAGATGAACGTTCCTAAGCAGAGAAAGAGTTCGTTATTGAAGGGAAAAACCCGGTCCAGATTGTTAGAACCACCCGAAGAGGCGAATAAGAAATCGGGTCATGGCCCGAGATCGGATGATGATGAGGATGATCCTTTTTTTGAAGAGGATCTTCCAGATGAGTATAAAAAGACTCATTTCAGCTATTGGATTTTGCTTGAATGGTTGAGCTTGATTTTGATCATTACTTTATTAATAACCACTCTTAGTATTCCTCTTTTGAGGAACAAGAATCTGAGGCAGCTTAAGTTATGGAAATGGGAAGTAATGATTTTGGTTTTGATATGTGGTAGGTTGGTTTCTAATTGGGTTATTAAGATAGTTGTATTTTGTATTGAGAGGAATTTCCTTTTGAGGAAGAGAGTGTTGTATTTTGTGTATGGTGTGAAGAAAGCAGTGCAGAATTGTGTGTGGTTGGGTCTTGTTTTGATTGCTTGGCAATTGTTGTTTGATAAAAAAGTTCAGAGGGAAACTAATAGTTCATTCCTTGAAAGTGTGACTAAGATTTTGGTGTGCTTCTTGGTAGGTACTCTTGTGTGGTTGGTGAAAACCCTTGTGGTTAAGGTGCTTGCATCTTCTTTCCATGTTAGTACCTACTTTGATAGGATTCAGGAATCACTGTTTAATCAGTTTGTGATTCAAACACTTTCTGGACCGCCTTTGATTGAGCTTCAAAAGGCTGAAGAAGAGGAATGGAAGATTGTTGATGAGTTTCAGAAGCTGCAGAATGCTGGGGTTACCATACCTCCTGGTCTTAGGGCAACTGCTTTCTCTACCATCACGAGTGGAAGGTTGAAGAGTGGAAGGTTGAGGAGTGGATTGATCCAGAGAAGCCATATGATTTCGCGTCCGCTTTCGAAGATGTCAGATGAAGGGAATGGTGGGATAACTATTGATCATCTGCATAAGCTGAATCCGAAAAATGTTTCTGCTTGGAATATGAAAAGGTTGATTAAAATAGTCCGGCATGGGGCCCTTACTACATTGGATGAGAAGATACTTGGGTCAACTAATGAGGATGAGAATGCCACACAGATTAGAAGTGAAATTGAGGCCAAAGCAGCAGCAAAGAAAATATTTCTGAATGTGTCCAGGAACGGTTGCAGGTATATACGCATGGATGACTTGATGCGTTTTATGCGAGAAGATGAAGTTGAAAAAACTTTTAGTCTCTTTGAAGGAGCATCTGATAGCGGGAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTCAATGCCTTCCAAGAGAGGAGAGCACTTGCTCTGACATTGAATGATACCAAAACGGCAGTGAACAAACTTCATAGGATGCTCAATTTCTTAGTTATTCTGATCATAGTGATTATTTGGCTCTTGATATTAGGAATCGCCACCACCAAATTTCTTCTCTTTCTGAGCTCACAGGTTGTCTTGGTTGCATTTATATTTGGAAATACCTGCAAGACCATATTTGAATCAATTATTTTCTTGTTCGTCTTGCACCCATTTGACGTGGGAGATAGATGCGAAATTGATGGAGTCCTGATGGTTGTAGAAGAGATGAACATATTAACAACCATATTTCTCAGATTCGATTTTCAAAAGATTCTGATCCCAAACAGCGTCCTTGCGACAAAGGCCATAAGTAACTTCTATCGTAGTCCTGATATGAGAGACACTATTGAATTCTGTATACATGTATCTACCCCAATTGAAAAGATTTCAGCTGTGAAACAGAGAATACAGAGTTACATTGACAACAAGAAGGAGCATTGGTATGCTTCACCTTTCATATTCCTCAGGGATTGTGAACAATTAAACATGATAAGATTGACAATATGGCCAAAACATAAAATGAATTTCCAACACATGAGAGAAAGATTCTTGAGGAGATCCCTTTTGATTGAAGAGATGATCAAGATTTTCAAGGAGATTGACTTGCAGTACCGTCTCATGCCACTTGATATTAGCATTACAAGCATGCCTACCACTTCTGACCGACTTCCGCCTAGTTGGGCAACAATCACAGGTTGA 2607 0.4143 MAAGGDFTVKINDIDPSVVSPSIWRESSYEFWNDDGTTSSDERENTNQESFHFRHKAQLSPEEDPPSRLIGKFLHKQKASGDFSLDMDLEMDELQHDSGDGNLTPVVESPKANHHRISREVKVSFEEPASNVVDVANDHVVRRRSSKESSSLEEFQRHVKRDGHGASLSPSGDGEVLKCTSNASFEMNVPKQRKSSLLKGKTRSRLLEPPEEANKKSGHGPRSDDDEDDPFFEEDLPDEYKKTHFSYWILLEWLSLILIITLLITTLSIPLLRNKNLRQLKLWKWEVMILVLICGRLVSNWVIKIVVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWQLLFDKKVQRETNSSFLESVTKILVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIQTLSGPPLIELQKAEEEEWKIVDEFQKLQNAGVTIPPGLRATAFSTITSGRLKSGRLRSGLIQRSHMISRPLSKMSDEGNGGITIDHLHKLNPKNVSAWNMKRLIKIVRHGALTTLDEKILGSTNEDENATQIRSEIEAKAAAKKIFLNVSRNGCRYIRMDDLMRFMREDEVEKTFSLFEGASDSGKISKSALKNWVVNAFQERRALALTLNDTKTAVNKLHRMLNFLVILIIVIIWLLILGIATTKFLLFLSSQVVLVAFIFGNTCKTIFESIIFLFVLHPFDVGDRCEIDGVLMVVEEMNILTTIFLRFDFQKILIPNSVLATKAISNFYRSPDMRDTIEFCIHVSTPIEKISAVKQRIQSYIDNKKEHWYASPFIFLRDCEQLNMIRLTIWPKHKMNFQHMRERFLRRSLLIEEMIKIFKEIDLQYRLMPLDISITSMPTTSDRLPPSWATITG 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0279 868 MobiDBLite consensus disorder prediction 36 62 - -
Lal12g0279 868 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 865 - -
Lal12g0279 868 Coils Coil 422 442 - -
Lal12g0279 868 SUPERFAMILY Sm-like ribonucleoproteins 683 742 IPR010920 -
Lal12g0279 868 MobiDBLite consensus disorder prediction 204 226 - -
Lal12g0279 868 Gene3D - 693 742 IPR023408 -
Lal12g0279 868 MobiDBLite consensus disorder prediction 140 164 - -
Lal12g0279 868 MobiDBLite consensus disorder prediction 190 228 - -
Lal12g0279 868 Pfam Mechanosensitive ion channel 635 836 IPR006685 GO:0016020|GO:0055085
Lal12g0279 868 MobiDBLite consensus disorder prediction 94 115 - -
Lal12g0279 868 MobiDBLite consensus disorder prediction 140 175 - -
Lal12g0279 868 MobiDBLite consensus disorder prediction 31 68 - -
Lal12g0279 868 PIRSF Memb_At2g17000 14 868 IPR016688 -
Lal12g0279 868 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 865 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0279 Lal-Chr12 1986294 1990257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0279 23 865 Mechanosensitive Ion Channel Family AT1G78610 55.355 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0279 K22048 - gmx:102665658 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0279 12 1986294 1990257 Lal12g0279 12 1986294 1990257 ECH