Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0274 ATGGAGGGGTTAACAACAAGAGGAGGAGGAGGAGGAGGGTTGAGACATCTATTTATGACAATGTTTTTTACAAGCTTTGGTGCTGTCATAGTGATTCCAGCAATGACTGATGTAACATTAGCAGCACTATGTCCTGCTCAAGATCAATGCTCCCTTGCCATTTACCTCACTGGCTTCCACCAAGCTATGACAGGAATGGGATCAGTGGTGATGACACCATTGATAGGAAATTTGTCAGACCGGTATGGCAGGAAAGCTTTGCTTACACTTCCTCTATTACTTTCTGTTATTCCTCATGTGATATTGGCATATAGCAGGGCCACCAACTTCTTTTATGCTTACTATGTGGTCAAAATTCTTGCTGCCATGGCAGGTGAAGGCAGCTTCCAGTGTCTGGCTCTTGCATATGTGGCAGACAATGTTCCAGAAGGGAAACGAGGTTCAATGTTCGGAGTACTTGCTGGTGTAGGATCAGCATCATTTGTAGGTGGAACATTAGCTGCTCGTTTTCTATCCACTGCTTTGACATTTCAGGTTGCTGCAGTGTTTTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGAAAGTGTACCTGGAGGTGGTGCCATGAAGCAGCCTTTATTGAAAGAAGGCCAGGAACCATGCCTTCAACAGTGTGAGTCTGATTCATCAAACATGACAACAGGAACATTTAAGAAACTTCCTTCGGTGGGGGATTTAATTTCTATGCTCAAGTGTAGTACTACATTTTCACAAGTAGCAGTTGTTTTGTTCTTGAATAGTCTTGTAGATGGGGGTTTGATGGCTTCATTGCTGTATTATTTAAAGGCACGATTCCAGTTCAACAAGAATCAGTTTGCTGATTTGATGATGATTAGTGGTATTGGAGCAACTCTTACACAGCTATTTTTTATGCCCATAATAGTACCAGCTGTAGGAGAGGTCAAGTTGATTTCGATGGGGCTCTTAGTTAGCTGCATAAGTATGTTTGTCTACAGCATATCTTGGGCAGGATGGGTTCCTTATGCTCTAGCTGGTTGTTCTATTTTTGGAGTTTTTGTTCGCCCAAGTATTTGCAGCATTGCATCTAAAGAAGTTGGAACTACTGAACAGGGAATGGTTCAAGGATGCCTTTCTGGAATTAGTTCATTAGCCAACATAATTTCTCCATTAATTTTCAGTCCACTGACAGCCTTGTTCCTGTCAGATGAAGCACCATTTTATTTTCCTGGCTTCACTCTAATGTGCCTTGGGCTAGCACTGATGGCTGCATTTTTTCAGAGTCTAATGATCCAGGTTGTTCCTCCTACTGCGGTTTGCAAAACTAGCAGCAATCACTGCACTGAGACCATGGTCTGA 1365 0.4242 MEGLTTRGGGGGGLRHLFMTMFFTSFGAVIVIPAMTDVTLAALCPAQDQCSLAIYLTGFHQAMTGMGSVVMTPLIGNLSDRYGRKALLTLPLLLSVIPHVILAYSRATNFFYAYYVVKILAAMAGEGSFQCLALAYVADNVPEGKRGSMFGVLAGVGSASFVGGTLAARFLSTALTFQVAAVFSMIALVYMRIFLKESVPGGGAMKQPLLKEGQEPCLQQCESDSSNMTTGTFKKLPSVGDLISMLKCSTTFSQVAVVLFLNSLVDGGLMASLLYYLKARFQFNKNQFADLMMISGIGATLTQLFFMPIIVPAVGEVKLISMGLLVSCISMFVYSISWAGWVPYALAGCSIFGVFVRPSICSIASKEVGTTEQGMVQGCLSGISSLANIISPLIFSPLTALFLSDEAPFYFPGFTLMCLGLALMAAFFQSLMIQVVPPTAVCKTSSNHCTETMV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0274 454 Gene3D MFS general substrate transporter like domains 14 438 IPR036259 -
Lal12g0274 454 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 13 440 - -
Lal12g0274 454 Pfam Major Facilitator Superfamily 17 392 IPR011701 GO:0022857|GO:0055085
Lal12g0274 454 CDD MFS_SLC46_TetA_like 17 432 - -
Lal12g0274 454 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 13 440 - -
Lal12g0274 454 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 437 IPR020846 GO:0022857
Lal12g0274 454 SUPERFAMILY MFS general substrate transporter 17 427 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0274 Lal-Chr12 1955634 1961778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0274 10 448 Organic Solute Cotransporters AT2G16990 45.415 6.32e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0274 - - lang:109346552 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0274 12 1955634 1961778 Lal12g0274 12 1955634 1961778 ECH
Lal12g0274 12 1955634 1961778 Lal24g0393 24 2832843 2834244 LSH