Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0241 ATGATTTTCAATTCCACCTCTGTTGTTGTGAGGATGGGGTTATCTTCATCTGCTGATGCTGCTTCTGTGGATTCCATGACTCTCTTTGTGCTTCTCCTTTGTTCTTGTATTATCTTTGGCCATCTTCTGCAAAAGAGTAAATGGATGACTGAGTCAGTTGTTGCCCTCATCATTGGCCTTATTACTGGAATCATAATTCTAGTGTCAACTGGGGGGAAAAGTTCACGAGTCTTAGTATTCAATGAAGAACTTTTCTTTATATATCTTCTTCCACCCATCATATTTAATGCAGGGTTCCAGGTGAAAAAGAAGCAATTCTTTCGGAACTTTTTGGCAATTGTCTTGTATGGTGTTCTTGGGAGTCTAATATCATTTCTCATTGTGTCACTGGGTTCATTACAGTTGTTCAAAAAATTGGACATAGATTTAATGGCTTTGGGAGATTATTTTGCACTTGGAGCAGTATTTTCAGCTACAGATTCTGTATGCACATTACAGGTTCTTAATCAGGATGAAACACCTCATCTATATAGTCTAGTTTTCGGCGAAGGCGTTGTCAATGATGCTACATCTGTGGTTCTTTTTAATGCAATCCAGAAATTTGATCTCTCACACATTACCCCAACCAATATCTTTCAGTTCATTGGCAACTTTCTTTATTTGTTCCTGACCAGCACTTTTCTGGGAGTAGCTGTTGGCTTGTTCAGTGCTTACCTTATAAAGAAGTTGTACTTTGGAAGGCATTCCACTGACAGAGAAATTGCTCTCATGATTCTCATGGCTTACTTTTCTTATATGTTGGCTGAACTTCTGGATTTAAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTGTCATGTCGCACTACACGTGGCATAATGTCACTGAAAATTCTAGGATCACAAGCAGGCATGCTTTTGCAACTTTGTCTTTAATCTCAGAGATTTTCATCTTCTTGTATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAGATTTGCCAGCAACAGTCCATGGACATTATTTGGGACAAGTGCAATAATGCTTAGCTTGGTTCTGCTAGGAAGAGCAGCTTTTGTGTTCCCACTATCTTTTATAGCTAATTTATTTAGGAAGTCTAGGAATGACAAGATTGCATTTAAACAGCAGGTTGTTATTTGGTGGGCAGGGCTCATGAGAGGTGCTGTGTCCATTGCACTTGCATATAATAAGTTTACTACATCAGGGCATACTCAATTACAAGGGAATGCCATCATGATCACAAGCACCATCATAGTTGTTCTCTTAACTAATGTGGTGGGTGGATTATTGACCAAGCCTCTAATAAGGTTCATGCTGAATCCCCCTAAGCATGTAGAGAGTTCAATGGCATCTGATTTAGTTTCTGGAAAGACTCTGCCTCTTCTATCAAATGGACAAAACTCAGAATCTAACATAGACACTGGGAATCCCATTGACTCAAGTAAAGTTGTCCATCATTATTGGAGAATGTTTGATGATACTTTCATGCGCCCTGTATTTGGAGGTAGAGGATTCGTACCTGTTATTCCTGCTTCAACGACAGAGGACACTCAACATTAA 1581 0.3941 MIFNSTSVVVRMGLSSSADAASVDSMTLFVLLLCSCIIFGHLLQKSKWMTESVVALIIGLITGIIILVSTGGKSSRVLVFNEELFFIYLLPPIIFNAGFQVKKKQFFRNFLAIVLYGVLGSLISFLIVSLGSLQLFKKLDIDLMALGDYFALGAVFSATDSVCTLQVLNQDETPHLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITPTNIFQFIGNFLYLFLTSTFLGVAVGLFSAYLIKKLYFGRHSTDREIALMILMAYFSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTENSRITSRHAFATLSLISEIFIFLYVGMDALDIEKWRFASNSPWTLFGTSAIMLSLVLLGRAAFVFPLSFIANLFRKSRNDKIAFKQQVVIWWAGLMRGAVSIALAYNKFTTSGHTQLQGNAIMITSTIIVVLLTNVVGGLLTKPLIRFMLNPPKHVESSMASDLVSGKTLPLLSNGQNSESNIDTGNPIDSSKVVHHYWRMFDDTFMRPVFGGRGFVPVIPASTTEDTQH 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0241 526 PANTHER SODIUM/HYDROGEN EXCHANGER 9 523 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal12g0241 526 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal12g0241 526 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal12g0241 526 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal12g0241 526 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal12g0241 526 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal12g0241 526 PANTHER SODIUM/HYDROGEN EXCHANGER 9 523 - -
Lal12g0241 526 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal12g0241 526 Gene3D - 146 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0241 Lal-Chr12 1688618 1693598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0241 7 526 Antiporters AT3G05030 65.858 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0241 - - zju:107426063 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0241 12 1688618 1693598 Lal12g0241 12 1688618 1693598 ECH
Lal12g0241 12 1688618 1693598 Lal13g0211 13 1331076 1336094 ECH