Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0234 ATGAGAAAAACAGACATGACTGGAAGCAGTGAAGTCAACCTCAATGAATCTAAGAGGGTTGTTCCACTGAATACTTGGGTCCTTATTTCCAATTTCAAGCTAGCTTACAATCTACTAAGACGTGCTGATGGAACATTCAACAGAGAGTTAGCAGAGTTCCTTGACAGGAAGGTCCCAGCTAACACAATTCCTGTTGATGGGGTATTCTCTTTTGACCATGTTGATAGAAACACAAGCCTATTCAATCGGGTGTATCAACCTGCTCCCGAAAGCGAGTCCCCGTGGGGCATCATAGAGTTAGAGAAGCCCTTGAGCAACACAGAGATTGTGCCTGTCATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCCAATAGTGCTATCTATGACACCTTCTGCCGCCGCCTTGTGAGCATTTGCAAGGCTGTTGTGGTTTCTGTAAATTACCGCCGTTCGCCCGAGCATCGGTATCCGTGTGCATATGATGATGGCTGGGCTGCACTTAAGTGGGTTAAGTCAAGAACATGGCTTCAAAGTGGAAAGGATTCCAAGGTTTATGTTTACATGGCTGGTGATAGTTCTGGTGGTAATATTGCACATCATGTGGCAGTAAGGGCTGCTGAAGAAGATGTTGAGGTACTAGGAAACATTCTTCTTCATCCATTGTTTGGAGGGGAGAAAAGAACTCCTTCAGAGAAGAAACTTGATGGAAAGTACTTCGTGAGGTTGCAAGATCGCGATTGGTATTGGAGAGCATTTCTACCCGAAGGGGAAGATAGAGACCATCCTGCTTGTAATCCATTTGGCCCTAAAGGTAGAAGCCTTGCAGGAATCAAGTTCCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTGTCCAAGATTGGCAATTGGAGTATGTTGAAGGTCTCAAGAATTCTGGCCATGAAGTCAAGCTTCTTAACTTAAAGGAAGCCACTATTGGTTTCTACTTCTTGCCAAACAATGATCATTTCTATATCCTCATGGAGGAGATGAAGAACTTCGTCAATTCTAACTATTAA 1050 0.4371 MRKTDMTGSSEVNLNESKRVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTSLFNRVYQPAPESESPWGIIELEKPLSNTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTPSEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGRSLAGIKFPKSLVCVAGLDLVQDWQLEYVEGLKNSGHEVKLLNLKEATIGFYFLPNNDHFYILMEEMKNFVNSNY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0234 349 Gene3D alpha/beta hydrolase 2 347 IPR029058 -
Lal12g0234 349 SUPERFAMILY alpha/beta-Hydrolases 63 346 IPR029058 -
Lal12g0234 349 Pfam alpha/beta hydrolase fold 113 326 IPR013094 GO:0016787
Lal12g0234 349 PANTHER GIBBERELLIN RECEPTOR GID1B 7 346 - -
Lal12g0234 349 PANTHER ARYLACETAMIDE DEACETYLASE 7 346 - -
Lal12g0234 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Lal12g0234 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 189 201 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0234 Lal-Chr12 1652320 1654831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0234 6 347 Carbohydrate Esterase AT3G63010 78.134 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0234 K14493 - gmx:100804463 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0234 12 1652320 1654831 Lal12g0234 12 1652320 1654831 ECH
Lal12g0234 12 1652320 1654831 Lal13g0201 13 1268414 1270948 ECH
Lal12g0234 12 1652320 1654831 Lal13g0201 13 1268414 1270948 LSH
Lal12g0234 12 1652320 1654831 Lal24g0177 24 1296482 1299060 LSH