Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0168 ATGGAATTAAGCTATCCATCAGAAGAGTACTCCATTAGTTCAAGTGAAGAAACTGATGACATGGGAACTGGAAGATCCTATGAGTGTTTTTTTTGCAAGAGAGGCTTCACTACTGCACAAGCTTTAGGTGGACACATGAACATACACAGAAAAGATAGAGCCAATAATAACAAGGTCAAACCCAATTTCCTTCCTTCCAGTTCAAGCAAGGTTGTTGATGATAATAACTATTCAGATCTTGGTTTCTATTCACCAATTCCAACCCATCTTGTTGCAGGAGGGAATAATAATAATGATAATACTTGTTACTTTTCAACTATCACTCCTGATCTTGAGGTAGATACTACTGATAACAATTACCATCAATTTTACTTTCCTTCACACACATGTGGTATTAGGCCTTCTTCCAATCTAGGAAATCACAAGGATCGTAGACACTTGTTTGGACAAGAATGGAGTCAGAGTTTGAGCCTGTACACTAATTCAGACAAGATAGAAGACAACACTGAAGAGGGTGGTCTTGATTTGGAGCTTAGACTTGGTCAACATCCATAG 555 0.382 MELSYPSEEYSISSSEETDDMGTGRSYECFFCKRGFTTAQALGGHMNIHRKDRANNNKVKPNFLPSSSSKVVDDNNYSDLGFYSPIPTHLVAGGNNNNDNTCYFSTITPDLEVDTTDNNYHQFYFPSHTCGIRPSSNLGNHKDRRHLFGQEWSQSLSLYTNSDKIEDNTEEGGLDLELRLGQHP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0168 184 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Lal12g0168 184 SUPERFAMILY beta-beta-alpha zinc fingers 25 53 IPR036236 -
Lal12g0168 184 MobiDBLite consensus disorder prediction 1 21 - -
Lal12g0168 184 Gene3D Classic Zinc Finger 7 79 - -
Lal12g0168 184 MobiDBLite consensus disorder prediction 164 184 - -
Lal12g0168 184 PANTHER OS07G0101800 PROTEIN 7 184 - -
Lal12g0168 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Lal12g0168 184 MobiDBLite consensus disorder prediction 163 184 - -
Lal12g0168 184 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 7 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0168 Lal-Chr12 1195049 1195603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0168 27 88 C2H2 Transcription Factor Family AT5G43540 53.226 3.85e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal12g0168 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0168 - - gmx:102670484 178.718