Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0166 ATGGGTTCTGTAAGTGGAAATGGCACAGGCTCTTCTAGCACTGGATCTCCATGTGGGGCATGCAAGTTCCTTAGAAGAAAGTGTGCACCTGATTGTATCTTTGCTCCTTACTTTTGTTCTGAACAAGGAGCTGATAGATTTGCAGCCATACATAAAGTGTTTGGTGCTAGCAATGTTTCTAAGTTACTTTTGCATATACCAGCTCATGATCGATGTGAGGCTGTGGTTACAATTGCTTATGAAGCACAAGCTCGTATTAGAGACCCTGTTTATGGTTGTGTCTCCCATATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAGGCACAACTGATGCAAGCCAAGGCACATCAGAACCTGATAGAGAATCAATGGTCAGGGAATGTTGCTGCAAAACAATTCAATCCATTTTGTCCCACTTCAATGATGAATCCTATATCTCCCCAAAGTTCATCAATTGATCATAGCAGCACCAGTGATGGAATGAGCATGCAAGATACACAAATCAGAGAAGATTCCTCATTCCAAGCTTGGGCTAAGAAAATATCATATAACAATGACTTTGGTGAGCTCCAAGATTTGGCACTCAGGATGATGCAGAGGAACTATAACTAG 615 0.4195 MGSVSGNGTGSSSTGSPCGACKFLRRKCAPDCIFAPYFCSEQGADRFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAHQNLIENQWSGNVAAKQFNPFCPTSMMNPISPQSSSIDHSSTSDGMSMQDTQIREDSSFQAWAKKISYNNDFGELQDLALRMMQRNYN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0166 204 MobiDBLite consensus disorder prediction 147 166 - -
Lal12g0166 204 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Lal12g0166 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 10 200 - -
Lal12g0166 204 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 200 - -
Lal12g0166 204 Coils Coil 97 117 - -
Lal12g0166 204 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0166 Lal-Chr12 1185283 1187089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0166 5 200 AS2 family AT2G42430 52.066 4.05e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal12g0166 LOB 3.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0166 K13944 - gmx:100801508 270.781