Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0156 ATGCGTTCTCTTCTTCTTCCTCATCGCTCACTGTTACTCTCTCAAACTCCTTCTATTATTATTAATAAACCAACCTCTCTTCCTTTCTCTTTTTTCTCTCTTTCCCATTCAGATGTAGGATTGTGTAGAGCCAGTCAAGTTGCTGATTTGTTCCCAGCTGTGTCTCCGGAGATAATTGTGCGAGAGGCGAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCGGACTATTCCTTCCCTTTAGATTTTGTACTAAGGATGGACAGATTGGTGGCTATGTTGGCAGGATTCACCATACCAAATGACTGCAAAAGAACCTGTTTGGTTGCTGTTACTGGCTGCTCATTTGATGAATTTATCTTATTTGGAAGTCAAGATTTCAAGATTGGTGGTTTTGATTGGAAATTTAGCCTCAACAAGGGATATGTGGCTGGTATATTGACTGTAGACACTGTTGCAGACTTTCTTCCTAGAAAAGGGCCTCTTCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAACTTTAGGGGGAAGGGAATAGCTAAAAAATTGGTAGCAAAGGCAGAATCACATGCCAGAAGTTGGGGCTGCCGTGCTATTGCATTGCACTGTGATCTGAAAAACCCTATAGCTTCAAAGTTGTACCAAGGCCAAGGTTTCAAATGTATCAAGATTCCAGAAGGAGCAAACTGGCCTCAGCCAAAGACCTCACCAGATATTAAGTTCAACTTCATGATGAAGCCTCTCAACTACTCAGCTGCTTCTACTCAGTTGAAGCCTTGA 819 0.4335 MRSLLLPHRSLLLSQTPSIIINKPTSLPFSFFSLSHSDVGLCRASQVADLFPAVSPEIIVREARLEDCWEVAETHCSSFFPDYSFPLDFVLRMDRLVAMLAGFTIPNDCKRTCLVAVTGCSFDEFILFGSQDFKIGGFDWKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVRENFRGKGIAKKLVAKAESHARSWGCRAIALHCDLKNPIASKLYQGQGFKCIKIPEGANWPQPKTSPDIKFNFMMKPLNYSAASTQLKP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0156 272 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 57 239 IPR016181 -
Lal12g0156 272 Pfam Acetyltransferase (GNAT) family 147 232 IPR000182 GO:0016407
Lal12g0156 272 Gene3D - 54 236 - -
Lal12g0156 272 CDD NAT_SF 174 215 - -
Lal12g0156 272 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 112 262 IPR000182 GO:0016407
Lal12g0156 272 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 33 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0156 Lal-Chr12 1106476 1108741 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal12g0156 Acetyltransf_1 2.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0156 - - adu:107467912 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0156 12 1106476 1108741 Lal12g0156 12 1106476 1108741 ECH
Lal12g0156 12 1106476 1108741 Lal13g0134 13 862648 870171 LSH
Lal2g1036 2 7112657 7115082 Lal12g0156 12 1106476 1108741 PCT
Lal12g0156 12 1106476 1108741 Lal2g1036 2 7112657 7115082 PCT