Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0144 ATGGGTTGTTGTTCAAAATTTTATCTTGTTTTGCTTTTGTCCGTTTATGTGGGAATTTCTTTAGCTTCACTCTTAGAAGATCAAAAGAGAGATAAGATTAATGACCTTCCAGGACAACCAGGGAACGTGGGGTTTGATCAGTACTCAGGGTATATTACTGTGAATGAGCAGAGAGAGAGGGCATTGTTTTACTGGTTGGTGGAAGCACCACTCAGTCGTGGACCACAGTTAAGGCCACTAGTGTTGTGGCTTAATGGTGGCCCTGGATGCTCCTCGGTTGCTTATGGTGCATCTGAAGAAATTGGTCCTTTTCGCATTAGGCCTGATGGCAAGACACTTTTCATGAATCCTTATGCTTGGAACAATTTGGCAAATATACTGTTCCTGGATTCTCCGGCTGGTGTTGGTTTTTCATATTCTAATAAAACAACAGATCTGTACACCTTTGGTGACCAGAAAACTGCTGAGGATTCATATACGTTTCTTGTTAATTGGTTTGAAAGGTTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCACAACTTGTTTACCAGAAAAATAAGGGAATCAAGGATCCAGTTATAAACTTCAAGGGATTTATGGTTGGAAATGCCGTTACAGATGATTATCATGATTATATTGGTACATTTGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCACATACAGGATGCTAAGAATTGTTTGTGACTTTGGGTCCTCTCAGCATCCATCAGTGCAATGCATGGAAGCTCTCAGAGTTGCTGTTGTGGAGCAAGGAAACATTGATCCATATAGCATTTATACACCGCCTTGTAATGATACATCAGCCCTCAGAAGCGGCTTGAAGGGGCGCTATCCATGGATGTCTCGAGCATACGACCCATGCACTGAAAGGCATTCCGATGTTTATTATAATCTTCCAGAAGTTCAGGAGGCACTTCATGCCAATGTAACTGGGATTCCTTATTTATGGAAGACATGCAGTGATATTGTTGGGAACTACTGGACTGATTCTCCACTATCTATGCTTCCTATATATCGAGAACTTATTGATGCTGGTCTCAGGGTATGGGTATACAGTGGAGACACTGATTCTGTTGTTCCAGTGACCGCCACTCGATATTCAATTGATGCGTTGAAGCTACCTACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGACTGACATTGGTAACAGTAAGAGGAGCAGGACATGAGGTTCCACTTCATAGGCCTCGCCAAGGATTTATTCTATTCAGATCATTCTTGGAAAACAAGTCCATGCCATCATCCACAATTTAA 1383 0.4187 MGCCSKFYLVLLLSVYVGISLASLLEDQKRDKINDLPGQPGNVGFDQYSGYITVNEQRERALFYWLVEAPLSRGPQLRPLVLWLNGGPGCSSVAYGASEEIGPFRIRPDGKTLFMNPYAWNNLANILFLDSPAGVGFSYSNKTTDLYTFGDQKTAEDSYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQLVYQKNKGIKDPVINFKGFMVGNAVTDDYHDYIGTFEYWWTHGLISDSTYRMLRIVCDFGSSQHPSVQCMEALRVAVVEQGNIDPYSIYTPPCNDTSALRSGLKGRYPWMSRAYDPCTERHSDVYYNLPEVQEALHANVTGIPYLWKTCSDIVGNYWTDSPLSMLPIYRELIDAGLRVWVYSGDTDSVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQGFILFRSFLENKSMPSSTI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0144 460 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Lal12g0144 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 457 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 PANTHER CARBOXYPEPTIDASE 12 457 - -
Lal12g0144 460 Gene3D - 311 347 - -
Lal12g0144 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Lal12g0144 460 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Lal12g0144 460 SUPERFAMILY alpha/beta-Hydrolases 29 455 IPR029058 -
Lal12g0144 460 Gene3D - 358 451 - -
Lal12g0144 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0144 Lal-Chr12 1003388 1008023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0144 321 455 Calmodulin-binding Proteins AT2G22960 30.147 1.50e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0144 K16297 - gmx:100805722 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0144 12 1003388 1008023 Lal12g0144 12 1003388 1008023 ECH