Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0143 ATGCCGCCTGAACCGTTGCTTTGGGATCGAAAGGAATTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCTTTGGGCTCTGTTTCAAGATGGAGAGATTCTCCTCATCACCGCAGAACACCAGGTCATGGTAAGCAGGGCAGTTGGCACCCATTTTCCGAAGAATTGGGCCATGGGTATGCGGTTTCTCGGTCCAGTGACAAAATGCTGGAGGACAATATTAGGCCATCATCATTTTCACGTGGTGATGGAAGATATGTGAGGAACAATAGGGAAAATAGAGGACCCTTTGGCCAGAGAGATTGGAGAGGACATTCATGGGAAGCTACCAACAGCTCTTTGAATATGTCCAGGAGACCACCAGATGTGAAAAATGACCAGAAGTCAGATGGTGTCCTAACATATTCCTCTTACCCACATTCTGATTGCGTGAACACTCGGGATCAGCACAACTCAAAAGACCAGCATGATAAGATGGGTGATGTCAACGGGTTTGGAACAGACCCGGGATGCGATAAAGGGAAATCTCTGGGTTCAATTGACTGGAAGCCACTTAAATGGAGCAGATCTGGTGGCTTGTCATCACGAGGCTCAGGTTTTCGTCAATGTAGTAGGTCGAGGAGCATGGGAGGGGAAGATTCATATGGAGTGAAGATTGACTTGCCACCCAAAAATGCTCCCGTTAATGAGGAGCATTCGGGGGAGGCTGCTACTTGTGTGACTTCTTCTGCACCATCTGATGATACAACTTCTAGAAAGAAACCTAGGCTAAATTGGGGTGAGGGGCTTGCTAAGTATGAGAAGAAAATAGTCGATGGGCCTGATCTTTGTGCAAACAAAGATATCCATTTCAGTAATATGGAACCCGATGATAATCCTAGTCCCCACGACACAGTAGATAAAAGTCTGAAAATTACAGGATTTTCAGGCTGTGAATCTCCTGCTACTCCTACTGCCTTCAGTTCCTCCCCAGGTATGGATGATAAATTATTTGGAAAGACTGCAAGTGTGGACAATGATGTCAGTAACTTGACTGTTTCAGCTGTTCCTGGGTTCCAAAATCATCTGCAGAGGTTTTCTTTTAATTTAGAGAAATTGGATATTGACTCCTTGAATAATATGGGAGCTTCAATTACCGAGTTGGTACAATGTGATGATCCAAGTTCTGTGGATTCTGGTCTTGCGAGTTCAAGTGCAATGAATAAATTGCTGACATGGAAAGCTGACATTTCAAAGGTACTAGAAATGACTGAATCTGAAATTGATTCACTTGAAACTGAACTTAAGTCTCTAAAATCCAAAAATGGGGATAGGTGTCCATGTCCAGCAGTAGCATTGGGCTCCCAGCGGGTATGTCAACACAGAAAGCCATGTGAAGAACATTCTGGAGTCTCTGATAAGGTCATTCTGCCTGAACCCTTAGAACTTATTTCTTCCGATGGCCCCCTTGTGGACAAGAGGCCTCTCTCAACTAATTTACACAGTAGTCATGAAAATGGCAAGGAAGAGAATATTGATAGTCCTGGAACAGCAACATCTAAATTTGTAGAGCCTCTGCCTTTGACTAAAGTTGTTTCTTCATGTGATACTATCAGATGTGATTACTTCTCTGGGGACTTGGATGTTATGCAGTCTGCAGCCGTGAAATGCTTAGGTCCCTGTACTACCAGGAAAGGTGCCAGCGTATCTGCTTGTGGTGATGGCAATACATTTATAGAGACAGAAGATTGTATGAATGCTGGTACCCTTGGTTCCAGCTTGTGTCACAACACCGGGGACAGTTTATATAATATAATTATTACTTCCAACAAAGAATCTGCAAACAGATCATGTGGGGTATTGGCTAAGTTATTGCCAAAAGAATGCTGTGAGATTGGTAATATGGGAGGTAGCAGTAGTGACTCATTGTCCCATAATGCATCCATCGTGGAAAAGTTTGTGGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATCACACTTAAGTTCAAAGCATTGCATCACTTGTGGAAAGAAGATATGCAGTTACTGTCCATAAGGAAATGCCGCCCAAAATCTCACAAGAGACATGAACTTAGTGTGCGATCTACCTGTAATGGTATTCAGAAGAATCGGTCATCCATTCATTCACGTTTTCTGTATCCTGGAAATCATCCAAGCTTGGTTCCAACTTCTAAGATGATTAATTATACAAGCAAACTGCTTTTAGAACCTCAAGTTGAAATTCAAAGAAACACCCTGAAGATGCCAGCGTTAATTTTGGATGAGAAGGAGAAGTTGTTTTCTAAGTTCATATCCAGCAATGGGCTTGTTGAAGATCCTTTGGCTATCGAGAAAGAAAGGACTATGATCAATCCTTGGACAGCAGAAGAGAGGGAAATTTTCTTGGAGAAATATGCTGTGTTTGGAAAAGATTTTCATAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCATAACTCTGAGTGTTTTGAAAAACTTAAGAAGCAAGATGGCAGTAAGCTAAGGAAGTCATTTTTAGCTAAAACTGATATGATGCCATCGGGCAGAAAATGGAATCATGAAGTGAATGCTGCTTCACTCAATATTTTGAGTGCCGCTTCAGTGGTGGTGGATGGCATTTCTGGTAATAAAAGAATGCATGCAGGAAGTCTTCTTTTGCGGGATTATGGTAATGTAAATGCATCAGCGGATGATGATAGCAACACAGGCAGATATGGCAATTTTGATAGTCCTGGGGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTGGCATATGTGGTTCTATTTCATATGAGGCTAGCATAACAAGTTCAGCTGATCGTGTTGAAGGTAGTAAGGATAGGAAGTTTCTGAAAGTGAAACCTTCATGTGAACAACACTTAATGCCTGATGTTACTCCGAATGATGATGAGACTTGTTCAGATGAGAGTTGTGGTGAAATGGATCCTACCGAGTGGACAGATGAAGAAAAGGCTGCCTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTCACAAAGATATCATGGAGTGTTGGAACAAGGTCTCAAGAGCAGTGCAAAGTTTTCTTCAGCAAGGCTCGAAAATGCCTCGGATTGGAGCTCATGCGTTCTGTACCTGAAAATATTGGATCCCCATTGAATGATAATGTAAATGATGGTGGGAGTGACACAGATGATGAACGTGTTGTAGAGACAGGCTCAACAGTTGGCACTGAAAAGTTGGGCATGAAAACATATGAGGACCTTCCTTCTGTCATGAACACGCACCATGATGAATCCCTGGCTGTGGAAGCTAGGAAGCTGTCAACTCAATTGAACAATTCAAAGGAAATTAATGGGACAGAAGCAGATCATAAAGATGTAAATGTGGATTCTGATGCTTGTACAAGTAAGGCTGAACATATAGTGAGCTCCGGTGGTAGTGATGTTGTGTTGTCCAGTTCTGATAAGTCTGGTTCAGTTAGCGGAAAGGAAGTTATGAATATGTCAGATAGTACTGAAGCTGGAAAAGATAAAGCAGATAAAATCGGAGGTGCAACTACAGAGTTGATTTCTGCTTTGGAGATAATTGAACCGTGCAAGTCTAATTCTGTTGCTGAGCACAGACAGGTTTCTGATGTTTTTTCTGGGGGTCTTGGAAATGAACCGGGGAGGCAGACTTCGCCCCAATGTTTTGATGATAGAGACAATAAACATGAAGTTGATACAGGTGTTGTAGCTAAATTGAAAAGAGTCCGTGGTTCAAGTACACCAGTAAATGCTTCACTCTCATCTGTGGGCAATTCCTGCTCAGTATTGAGTTTAGATACTGAAAATAAACACATTTCCCTGGGAAGGCCTTGTATCTCAGCATTTTCGTTTGAGAATCATCATGCAACTGCAAATTCTTCGTTGCAAAATACTGCTGCCACAAATGTTAAATGTGAGGAAACAGCTGTCCAAGATCGACGGTCCTCCACTTGTCATATTGCTATTAGCAATGGTGACCATCAGTTTCCTATTCCTGGAAATCATTTTGAGGCTGGTAGCATCATTCAGGGCTATCCCTTGCAAGTTCCCATCAAGAATGACATGAGTGGGGATATGAATTGTAGCAGTTCAGCAAGTGAGTTGCCTCTTCTGCCCCAAAAGATTGAACACACAGATGATCAATTCAAAACAAGATTGCATTTGTCAGATTCAGAAAAAATATCCAGAAAGGGTAATGTGAAACTGTTCGGAAAGATACTAACCAATCCTTCATCTACCCAGAATCCTAATTTGACTTCCAAGGCAAGTGAAGAAAATGTCACCCGTCATCCCAAGTTAAGCAGCAAGTCTTCCAGTCTGAAGTTTTCTGGTCATCACAATGCTGATGGAAATTCGAAAGTTTTGAAGTTTGACCGTAATGATTACCTGGGCCTTGAAAATGTTCCTGTGAGGAGTTATGGCTATTGGGATGGGAACAGAATACAGACTGGTCTCTCATCGTTGCCTGATTCTGCCATCTTGCTAGCAAAGTATCCTGCTGCTTTTGGTAATTATCCTTCCTCATCTGCCAAGTTGGAGCAACAGTCATTGCAGGTCTTTGCCAGGAATAATGAACGGCATCTGAGTGGTACATCTGCATTTGCAGCTAGAGACATCAATGGCAGCAATGCTATGATTGATTATCAGATGTTTAGAAGTAGGGATGGTCCAAAGATGCAGCCATTTGTGGTAGATGTGAACCACCGCCAAGATGTGTTCTCTGAGTTGCAGAGAAGAAAAGGGTTTGAAGCAATCTCTAGTTTACAACAACAGGGGAGAGGAATGGCGGGAATGAACAGCATTGGAAGACCTGGGATTCTTATGGGAGGATCATGCAGTGGTATTTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAATCTGGGAGCATCACAAGAGACCATGAATCATGGGGAGGGAAAGGTGACCTAGGAAGGTAG 5016 0.4234 MPPEPLLWDRKEFFKERKHERSESLGSVSRWRDSPHHRRTPGHGKQGSWHPFSEELGHGYAVSRSSDKMLEDNIRPSSFSRGDGRYVRNNRENRGPFGQRDWRGHSWEATNSSLNMSRRPPDVKNDQKSDGVLTYSSYPHSDCVNTRDQHNSKDQHDKMGDVNGFGTDPGCDKGKSLGSIDWKPLKWSRSGGLSSRGSGFRQCSRSRSMGGEDSYGVKIDLPPKNAPVNEEHSGEAATCVTSSAPSDDTTSRKKPRLNWGEGLAKYEKKIVDGPDLCANKDIHFSNMEPDDNPSPHDTVDKSLKITGFSGCESPATPTAFSSSPGMDDKLFGKTASVDNDVSNLTVSAVPGFQNHLQRFSFNLEKLDIDSLNNMGASITELVQCDDPSSVDSGLASSSAMNKLLTWKADISKVLEMTESEIDSLETELKSLKSKNGDRCPCPAVALGSQRVCQHRKPCEEHSGVSDKVILPEPLELISSDGPLVDKRPLSTNLHSSHENGKEENIDSPGTATSKFVEPLPLTKVVSSCDTIRCDYFSGDLDVMQSAAVKCLGPCTTRKGASVSACGDGNTFIETEDCMNAGTLGSSLCHNTGDSLYNIIITSNKESANRSCGVLAKLLPKECCEIGNMGGSSSDSLSHNASIVEKFVEKKRFARFKERVITLKFKALHHLWKEDMQLLSIRKCRPKSHKRHELSVRSTCNGIQKNRSSIHSRFLYPGNHPSLVPTSKMINYTSKLLLEPQVEIQRNTLKMPALILDEKEKLFSKFISSNGLVEDPLAIEKERTMINPWTAEEREIFLEKYAVFGKDFHKIASFLDHKTTADCVEFYYKNHNSECFEKLKKQDGSKLRKSFLAKTDMMPSGRKWNHEVNAASLNILSAASVVVDGISGNKRMHAGSLLLRDYGNVNASADDDSNTGRYGNFDSPGDERETVAADVLAGICGSISYEASITSSADRVEGSKDRKFLKVKPSCEQHLMPDVTPNDDETCSDESCGEMDPTEWTDEEKAAFLQAVSSFGKDFTKISWSVGTRSQEQCKVFFSKARKCLGLELMRSVPENIGSPLNDNVNDGGSDTDDERVVETGSTVGTEKLGMKTYEDLPSVMNTHHDESLAVEARKLSTQLNNSKEINGTEADHKDVNVDSDACTSKAEHIVSSGGSDVVLSSSDKSGSVSGKEVMNMSDSTEAGKDKADKIGGATTELISALEIIEPCKSNSVAEHRQVSDVFSGGLGNEPGRQTSPQCFDDRDNKHEVDTGVVAKLKRVRGSSTPVNASLSSVGNSCSVLSLDTENKHISLGRPCISAFSFENHHATANSSLQNTAATNVKCEETAVQDRRSSTCHIAISNGDHQFPIPGNHFEAGSIIQGYPLQVPIKNDMSGDMNCSSSASELPLLPQKIEHTDDQFKTRLHLSDSEKISRKGNVKLFGKILTNPSSTQNPNLTSKASEENVTRHPKLSSKSSSLKFSGHHNADGNSKVLKFDRNDYLGLENVPVRSYGYWDGNRIQTGLSSLPDSAILLAKYPAAFGNYPSSSAKLEQQSLQVFARNNERHLSGTSAFAARDINGSNAMIDYQMFRSRDGPKMQPFVVDVNHRQDVFSELQRRKGFEAISSLQQQGRGMAGMNSIGRPGILMGGSCSGISDPVAAIKMHYSNSDKYGGQSGSITRDHESWGGKGDLGR 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0143 1671 MobiDBLite consensus disorder prediction 16 256 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 976 996 - -
Lal12g0143 1671 ProSiteProfiles SANT domain profile. 783 831 IPR017884 -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 480 512 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 146 161 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 982 996 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1424 1462 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 16 35 - -
Lal12g0143 1671 SUPERFAMILY Homeodomain-like 996 1045 IPR009057 -
Lal12g0143 1671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1644 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1148 1176 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1424 1441 - -
Lal12g0143 1671 Pfam Myb-like DNA-binding domain 788 833 - -
Lal12g0143 1671 SMART sant 784 832 IPR001005 -
Lal12g0143 1671 SMART sant 995 1043 IPR001005 -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 129 145 - -
Lal12g0143 1671 CDD SANT 998 1037 IPR001005 -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1648 1671 - -
Lal12g0143 1671 Gene3D - 931 1052 - -
Lal12g0143 1671 Gene3D - 764 836 - -
Lal12g0143 1671 Pfam Myb-like DNA-binding domain 998 1038 IPR001005 -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1148 1188 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 105 120 - -
Lal12g0143 1671 ProSiteProfiles SANT domain profile. 997 1045 IPR017884 -
Lal12g0143 1671 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1644 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1057 1079 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 85 101 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 191 209 - -
Lal12g0143 1671 SUPERFAMILY Homeodomain-like 771 830 IPR009057 -
Lal12g0143 1671 Coils Coil 407 434 - -
Lal12g0143 1671 MobiDBLite consensus disorder prediction 1223 1244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0143 Lal-Chr12 985015 996577 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal12g0143 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0143 - - gmx:100810588 2156.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0143 12 985015 996577 Lal12g0143 12 985015 996577 ECH
Lal12g0143 12 985015 996577 Lal13g0121 13 756168 764359 LSH