Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0138 ATGGGGAAGAAAGGGAGTTGGTTTTCTACAGTGAAGAAAGTTTTTAATGGTTCAGATTCCAGAAAAAAACAGAAACAGAAACAGAAACACAAGTCAAATCTAGGATGTTTTGGGTATTATGAGGCACCTGAACCAGGATCTGAAGAAGAAGCAAGAGCACCAGTTGCTGTTGTTCCTTCTCTTCCACCTAGAAAAGATGTTGTTAAGCCAAGGGAGGTAGATAGTGAACAGGACAATCAAGCTTTGTCTTTGGCTTTAGTCACCGCAGTTGCAGCAGGGGCTGCTGTTGCTGCTGCTGCTGCAGAGGTTGCTCGTCTCAACACCGTGTCTCGTTATGCTGGAATAGCCGGGGAAGAAGTCGCAGTTATCAAGATTCAGACCGCATTCCGGGGATATTTGGCAAGAAGATCATTGCGGGGCATGAGAGGTTTGGCGAGGTTGAAAACATTGATACAAGGGCAATTTATTAAACGGCAAGCAGCTACAGCCTTGCAATGCATGCAAACTTTTTCGCGGCTGCAGTCTCAGATTCACGCGAGGAGGCTTCGAATGTCCGAAGAGAACCAAGCTCTTCAGCGTCAACTGGATCAAAAGCGAGAAAAGGAACTTGAGAAGTTGCAAGCAGCTGTTGCAGAAAAATGGGATGCTAGCGTGCAGTCAAAAGAGCAAATTGAAGCAAAAATGATGCATAGGCAAGTAGCTGCTATGAGAAGAGAGAAGGCTTTGGCCTATTCATTATCTCATCAGCAAACGTGGAGGAACTCTCCAAAATCCGCAAATGCGACATTTATGGATCCACACGACCCTCACTGGGGCTGGAATTGGCTAGAGCGATGGATGGCTTCGCGACCATGGGATGGGCAAAGCACTCTGCAACACAGTGATCATGCACCTGCTAAGGGTGCTGCTTCAAGCCATCCAACCATGTCAGTAAGGGAAATCACCAAATTGTATACTCTCCGCGATGAAAATCATCATGATAATAGTAAGAATTCTTCTCCTGCTACTAACCAAAAACCAAGTCGTGTTCATAGCCTCAACAATTCCCCCTCAGCTTCAAAGGCTAATGCAAAAGCAAAGGCATTATCAAGTCAGGGAGGTTCATGGGGTGGTAGTGCTGATGTCTCAACAAGCATGTTTCGGATAAACAACAAAAGCAATCACAGGCATAGCATTTCGGTATCTCCTCTTAGAGATTATGAGAGCCTTGCTAACTCACCTGCTTTTCCAACTCAAATATCATCCATAAAGGTGGCAAAGGCTAAGTCCCAAGTTCCAAGTCCATCTAGAAATAAAGGCACAATACTTGAAAAAGGAGCTGCTGTTTCTGCAAAGAATAGGCTTTCTTTCTCACCTTCTCCATCTGGTGCTAGAAGGCATTCTGTTCCAGATAAGGTTTCCAATAAGAGTGTTGCTATTCCTACTATCCCTGAAGAGAAAGAGAGAGTGAAAGTGAAAAATGGAGGGAGCAGGTAG 1476 0.4499 MGKKGSWFSTVKKVFNGSDSRKKQKQKQKHKSNLGCFGYYEAPEPGSEEEARAPVAVVPSLPPRKDVVKPREVDSEQDNQALSLALVTAVAAGAAVAAAAAEVARLNTVSRYAGIAGEEVAVIKIQTAFRGYLARRSLRGMRGLARLKTLIQGQFIKRQAATALQCMQTFSRLQSQIHARRLRMSEENQALQRQLDQKREKELEKLQAAVAEKWDASVQSKEQIEAKMMHRQVAAMRREKALAYSLSHQQTWRNSPKSANATFMDPHDPHWGWNWLERWMASRPWDGQSTLQHSDHAPAKGAASSHPTMSVREITKLYTLRDENHHDNSKNSSPATNQKPSRVHSLNNSPSASKANAKAKALSSQGGSWGGSADVSTSMFRINNKSNHRHSISVSPLRDYESLANSPAFPTQISSIKVAKAKSQVPSPSRNKGTILEKGAAVSAKNRLSFSPSPSGARRHSVPDKVSNKSVAIPTIPEEKERVKVKNGGSR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0138 491 MobiDBLite consensus disorder prediction 422 491 - -
Lal12g0138 491 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Lal12g0138 491 PANTHER IQ-DOMAIN 5-RELATED 1 477 - -
Lal12g0138 491 SMART iq_5 117 139 IPR000048 GO:0005515
Lal12g0138 491 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Lal12g0138 491 Coils Coil 181 212 - -
Lal12g0138 491 MobiDBLite consensus disorder prediction 287 310 - -
Lal12g0138 491 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 477 - -
Lal12g0138 491 MobiDBLite consensus disorder prediction 324 372 - -
Lal12g0138 491 MobiDBLite consensus disorder prediction 330 372 - -
Lal12g0138 491 MobiDBLite consensus disorder prediction 475 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0138 Lal-Chr12 969647 973552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0138 1 473 IQD Protein Family AT5G03040 42.412 9.25e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0138 - - lang:109335166 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0138 12 969647 973552 Lal12g0138 12 969647 973552 ECH
Lal12g0138 12 969647 973552 Lal13g0116 13 729547 734070 LSH