Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0136 ATGATGATGAAAACCACAACAAGAACTACTACATCATCAGCATCTCCTCCTTCATCAATCCCAATAATAAACCATATTCCCACAACCATGCTCTCTATTTATTCTAACTCTCCTTTATCTTCATCTTCTTCACCTCCTTTACAATCTCATTCTCCCATACCTTTCCCTTCACTTTCACCTTCTCACTCTTCTCCTCCTACCTCAGCTGCTGTTACTGCTTCTCCTCCACCACCGGTTCAGGTGGTTAGCCCTTGTGCTGCCTGTAAGATCCTCCGCCGCAGGTGTGTGGAGAAGTGTGTCTTGGCTCCTTATTTCCCTCCAACTGATCCTCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGTAACATCATCAAGTTTTTGCAGGAACTACCAGAATCACAGAGAGCAGATGCAGTGAGCAGCATGGTATATGAAGCAAATGCTAGACTTAGAGACCCAGTGTATGGGTGTGCAGGTGCAATATGCCAACTTCAAAAGCAAATTAGTGAGCTACAAGCACAGCTGGCAAAAGCACAAGCTGAGGTAATCAACATGCAATGCCAACAAGCTAATTTAGTTGCTCTAATTTGCATGGAAATGAGTCAATCACAGGACCAGAACATGCTTCAGCCTCAACCTAATGATGTTGATATGAGTTGCTTGTTTGATGACAACAATTTTGGCTCTGCTTGGGAGCCTCTATGGACATGTAACTAA 723 0.4385 MMMKTTTRTTTSSASPPSSIPIINHIPTTMLSIYSNSPLSSSSSPPLQSHSPIPFPSLSPSHSSPPTSAAVTASPPPPVQVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQISELQAQLAKAQAEVINMQCQQANLVALICMEMSQSQDQNMLQPQPNDVDMSCLFDDNNFGSAWEPLWTCN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0136 240 Coils Coil 163 190 - -
Lal12g0136 240 ProSiteProfiles LOB domain profile. 83 184 IPR004883 -
Lal12g0136 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 70 223 - -
Lal12g0136 240 MobiDBLite consensus disorder prediction 1 22 - -
Lal12g0136 240 Pfam Lateral organ boundaries (LOB) domain 84 181 IPR004883 -
Lal12g0136 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 70 223 - -
Lal12g0136 240 MobiDBLite consensus disorder prediction 42 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0136 Lal-Chr12 954473 956877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0136 81 239 AS2 family AT1G07900 69.939 1.17e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal12g0136 LOB 4.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0136 - - gmx:100806667 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0136 12 954473 956877 Lal12g0136 12 954473 956877 ECH