Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0130 ATGGAAGATTCAGAAGATGAGCTTCTGGATCTTACCCTTTCAGTTGCTGCTGATAGAGAGAGGAAAAAGAAGGGAAAGATAATATTAAGGGATCATAATAATATTGCTAGTTCTATGAGTACTAGTCATAGTATGAACCCATATGAGGATTGTTATGAAGGGGAGATCTTTAGGCTTCTTCAAGTGAGAGATCAAATGCTAAGACAAGACCATAGACTATGGAATAAAGGAGTTGTTGTTGAAGATGGTAATGGCCTTCCTTTGATCCATTTGCTTCTCACAGCTGCCACTGTAGTTGACAACAACAACTTTGGTTCAGCTTTAGAGAACCTCACTGAACTCTATAAAATTGTTTCCCTGAAAGGTGACTCAGTTCAACGTGTAGTTGCTTATTTTGCAGATGGCTTGGTGGCAAGGCTTCTAACTAGGAACTCTCCATTCTATGACATGCTCATGGAGGAACCAACAACTGGGGAAGAGTTTCTTGCATTCACAGATCTCTATAGGGTCTCACCTTACTACCAATTTGCTCATTTCACTGCAAATCAAGCAATTTTGGAAGTGTTTGAGAAAGAAGAAGAGAAAAACAACCGTGCTATTCATGTCATTGATTTTGATGTCTCCTATGGTTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAGAAGGCAACAAGTGGAAGCAAAATATCTCTCAGGATAACTGGATTTGGTAAGAACTTGAAAGAACTTCAAGAAACTGAGTCTAGGTTGATTAGCTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAGTTTCAAGGATTGCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAGACTGTGGCAGTGAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTCTTAAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCCATTGCTGTGTTGGTAGAACAAGAAGGTAGCAGGAGTCCTAACAGGACCTTCTTGTCAAGGTTCACAGATACTTTGCATTACTTTGCAGCAATGTTTGATTCACTTGATGATTGTCTTCCAGTTGAGAGCACTGAGAGATTGAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATCAAAAGTATCCTCAACTATTATGACATTGATGGTGTGGATTGTCCCAAATATGAGAGAATGGAAACATGGAAAGCAAGGATGGAGAATCATGGGTTTGGTGGAACCAAAATAAGCTCAAAGTCTATAATCCAAGCAAAACTGCTATTGAAGATGAGGACTCACTATTGTCCACACCAATTTGAGGAAGAGGGTGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAATCAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTTTGCTAACTGTCTCAGCATGGCAACCAGTCTGA 1413 0.3999 MEDSEDELLDLTLSVAADRERKKKGKIILRDHNNIASSMSTSHSMNPYEDCYEGEIFRLLQVRDQMLRQDHRLWNKGVVVEDGNGLPLIHLLLTAATVVDNNNFGSALENLTELYKIVSLKGDSVQRVVAYFADGLVARLLTRNSPFYDMLMEEPTTGEEFLAFTDLYRVSPYYQFAHFTANQAILEVFEKEEEKNNRAIHVIDFDVSYGFQWPSLIQSLSEKATSGSKISLRITGFGKNLKELQETESRLISFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFLKISDTLGFVHSLNPSIAVLVEQEGSRSPNRTFLSRFTDTLHYFAAMFDSLDDCLPVESTERLRIEKKLLGKEIKSILNYYDIDGVDCPKYERMETWKARMENHGFGGTKISSKSIIQAKLLLKMRTHYCPHQFEEEGGGGFRVSERDESRAISLGWQNRFLLTVSAWQPV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0130 470 ProSiteProfiles GRAS family profile. 79 468 IPR005202 -
Lal12g0130 470 PANTHER OSJNBA0084A10.13 PROTEIN 8 468 - -
Lal12g0130 470 Pfam GRAS domain family 88 468 IPR005202 -
Lal12g0130 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0130 Lal-Chr12 903952 905364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0130 95 469 GRAS Transcription Factor Family AT3G54220 33.854 8.07e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal12g0130 GRAS 1.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0130 - - gmx:100809458 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0130 12 903952 905364 Lal24g0106 24 711563 713011 LSH
Lal2g1030 2 7077294 7078691 Lal12g0130 12 903952 905364 PCT
Lal12g0130 12 903952 905364 Lal2g1030 2 7077294 7078691 PCT