Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0119 ATGGAGCCTCTCTCCAAAAACAATAATAACAACAACGTTGCTAAGCCTTCTCTTCATGTAGAGGCTTTGGACCCTATTGAGCCAAGTCCTCTACGTAAGATCATTGTTGTTGCTTCCATAGCTGCTGGTGTTCAATTCGGGTGGGCCCTTCAGCTTTCACTTCTCACTCCTTATGTGCAATTACTTGGTATACCACATAAATGGGCCTCCTTCATATGGCTCTGCGGCCCCATCTCCGGCATGCTTGTTCAGCCTGTCGTCGGCTACCATTCCGACCGCTGTACTTCTCGATTTGGCCGCCGTCGTCCATTCATCGCTGCTGGTGCACTTGCCGTCGCTATTGCCGTTTTCCTCATCGGATATGCTGCTGATCTCGGTCACGCCACCGGTGATAACTTGGCCAAGCAATCCCGGCCCCGCGCTATAGCCATCTTCGTCATCGGATTCTGGATCCTCGATGTGGCCAACAACATGCTCCAGGGACCTTGCCGAGCACTCCTCGCCGACCTAGCCGCCGGAGATCACCGGAAAACGAGAAACGCAAACGCGTTCTTCTCGTTCTTCATGGCCGTCGGAAACGTCCTTGGCTATGCCGCCGGTTCATTCAGCGGCCTCCACAGAATGTTCCCGTTCACCATGACGAAAGCATGCGACATTTACTGCGCCAATCTGAAAAGCTGTTTCTTCCTCTCCATCATTCTCCTCCTAGCACTCTCAACCGCCGCTTTGATCTACGTGAAGGAGAGAGCCTTTGTTCCCGATCAGAAAAACCCTAACGTGGCGGAAGACGGTGGGATGCCATGTTTCGGCGAATTATTTGGTGCATTTCATGAACTAAAGCGTCCCATGTGGATCCTTCTATTGGTGACATGCCTTAATTGGATTGCATGGTTCCCTTTCTTATTATTCGATACTGATTGGATGGGTAAAGAAGTATACGGTGGGAAAGTCGGGAACGGGAAGGCTTCAAAGTCATACGATATGGGAGTCCACGCCGGTGCGTTAGGGCTCATGTTAAACTCTATTGTTCTAGGTGTCACATCACTAGGTGTTGAGTTTTTGGCGCGTGTAGTTGGGGGCGTGAAGAGGTTGTGGGGGATTGTTAACTTCTTACTTGCTATTTCCTTGGCCATGACGGTGTTGGTTACTAAAATGGCTGAGCATTCACGGCAGTTCCCCGGCGGTGATGTAAAAGCTGATCCTCTGCCACCTACCGGTGCTATCAAAGCTGGCGCGTTGACTCTTTTCTCGGTTCTGGGTATCCCTCTAGCGATTACTTACAGCATACCCTTTGCTATGGCATCTATTTTCTCCATCACCTCTGGGGCTGGCCAAGGGTTATCTCTTGGAGTTCTCAATCTTGCTATTGTCATACCACAGATGATTGTATCAGTGCTAAGTGGACCATGGGATGCTGCTTTTGGTGGTGGTAACTTGCCAGCGTTCGTGGTGGGCGCTGTGGCGGCCGCAGCCAGTGGCATATTATCCATAGTCCTTCTACCATCTCCACCACCAGAATTAGCCAAGGCTGCAACTGCTACTGGAGGAGGGTTCCATTAA 1560 0.5083 MEPLSKNNNNNNVAKPSLHVEALDPIEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWASFIWLCGPISGMLVQPVVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHATGDNLAKQSRPRAIAIFVIGFWILDVANNMLQGPCRALLADLAAGDHRKTRNANAFFSFFMAVGNVLGYAAGSFSGLHRMFPFTMTKACDIYCANLKSCFFLSIILLLALSTAALIYVKERAFVPDQKNPNVAEDGGMPCFGELFGAFHELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGNGKASKSYDMGVHAGALGLMLNSIVLGVTSLGVEFLARVVGGVKRLWGIVNFLLAISLAMTVLVTKMAEHSRQFPGGDVKADPLPPTGAIKAGALTLFSVLGIPLAITYSIPFAMASIFSITSGAGQGLSLGVLNLAIVIPQMIVSVLSGPWDAAFGGGNLPAFVVGAVAAAASGILSIVLLPSPPPELAKAATATGGGFH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0119 519 Gene3D MFS general substrate transporter like domains 26 499 IPR036259 -
Lal12g0119 519 SUPERFAMILY MFS general substrate transporter 32 504 IPR036259 -
Lal12g0119 519 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 16 510 - -
Lal12g0119 519 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 504 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal12g0119 519 PANTHER SUGAR TRANSPORTER 16 510 - -
Lal12g0119 519 CDD MFS_SLC45_SUC 34 479 - -
Lal12g0119 519 Pfam MFS/sugar transport protein 42 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0119 Lal-Chr12 820796 824217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0119 1 519 Sucrose Transporter Gene Family AT1G71890 67.179 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0119 K15378 - gmx:547679 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0119 12 820796 824217 Lal24g0092 24 613319 616054 LSH
Lal9g0908 9 6844079 6846140 Lal12g0119 12 820796 824217 PCT
Lal12g0119 12 820796 824217 Lal2g1029 2 7051030 7053818 PCT