Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0113 ATGGAGGTTCACATCTTCCTTTTCTTTCTCACTCTTTCCTTAGCCATCATCCGTTTCTTTCACAACCGCCACAACAACAATAACCAACCACCCGGTCCAACCGCTCTCCCCATTATAGGAAATCTCCACCAACTTGGTTCCAAACCACACTCCACCCTCTCCTCCCTCGCTCAAACCCATGGCCCCCTCATCTCCCTCCGCTTCGGCTCCGTCACTGTCGTTGTCGCCTCCTCTCCGGCCACCGTCAAATTACTCCTCCAAAAAAACGACCAATCCTTCGCCAACCGCCCTATCCCTGACTCTGTTGCTGCTCAGCCCAACGTCCAAGACACGCTAGCATGGTCCCCCGCTGATGTGCCGTGGCGCAACCGCCACCGCATCTGCACTACTCAGATATTCAGCAACCAACGCCTCGACTTGTTACAACACCTTCGCCACCAAAAGGTTCAGCAACTATTACACCATCTACATAAGGAAGCTTCAACAAAAACCGTAGTTAACATAGGGGAACTTGCGTTCGCCACAATGCTGAACCTTGTTTCGAACACAGTGTTCTCTGAGGACATGGTGGATCCTGAGTTTGAGACCGCGGGTGAGTTGAAGGATTTGGTGTGGAGGATAATGGAGGATGCAGGGAAGGTGAATCTCTCTGATTATTTTCCGGGTTTGAAAAGGTTTGATTTGCAAGTGTCAACAAGATCAAGCTTCAGAGAAACCCTTCGCCTTCATCCACCTGTACCTCTACTCTTGCCTTATATTGCAGGGAATGATGTTGAAGCAAATGGGTACACCATTCACAAAGGAACACAACTACTCATAAATGCATGGTCTATTGGCAGAAACCCTGAGTTTTGGGATGATCCATTGTTGTTTCAACCTGAAAGGTTTCTGAGGTCCAACATAGATTATTCTAAAGGGAGCAGGGATTTTGAGTATATACCTTTTGGTGCTGGAAGAAGAATTTGCCCAGGTTTGCCACTGGCTAATAGGATGATTATACATTCTTTTGAATGGGAACTTCCTGAGGGTGTTACTCCTCACAAGCTTGACATGAATGAGCAGTATGGAATAACATTGAACAAACTTGTTCCTCTTTCTGTTATTCCATTCTCTGTATGA 1119 0.4701 MEVHIFLFFLTLSLAIIRFFHNRHNNNNQPPGPTALPIIGNLHQLGSKPHSTLSSLAQTHGPLISLRFGSVTVVVASSPATVKLLLQKNDQSFANRPIPDSVAAQPNVQDTLAWSPADVPWRNRHRICTTQIFSNQRLDLLQHLRHQKVQQLLHHLHKEASTKTVVNIGELAFATMLNLVSNTVFSEDMVDPEFETAGELKDLVWRIMEDAGKVNLSDYFPGLKRFDLQVSTRSSFRETLRLHPPVPLLLPYIAGNDVEANGYTIHKGTQLLINAWSIGRNPEFWDDPLLFQPERFLRSNIDYSKGSRDFEYIPFGAGRRICPGLPLANRMIIHSFEWELPEGVTPHKLDMNEQYGITLNKLVPLSVIPFSV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0113 372 PRINTS E-class P450 group IV signature 229 245 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 PRINTS E-class P450 group IV signature 263 277 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 PRINTS E-class P450 group IV signature 279 297 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 PRINTS E-class P450 group IV signature 306 322 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 236 370 - -
Lal12g0113 372 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 232 - -
Lal12g0113 372 SUPERFAMILY Cytochrome P450 24 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 315 324 IPR017972 GO:0005506|GO:0016705
Lal12g0113 372 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 236 370 - -
Lal12g0113 372 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 232 - -
Lal12g0113 372 Gene3D Cytochrome P450 234 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 Pfam Cytochrome P450 30 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 Pfam Cytochrome P450 234 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g0113 372 Gene3D Cytochrome P450 22 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0113 Lal-Chr12 756098 757359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0113 6 372 Cytochrome P450 AT3G26180 29.820 1.98e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0113 - - vra:106769993 300.056