Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0102 ATGACAGAAGTGGAGACAGCGTCGCCGACGGCGGCATCGGTGCCGGCAACTCCGGAAACGCCGGGAGGGCCACTGTTTACGTCGCTGCGAGTTGACTCAATGTCACACGAGCAGAACTCGTTCTCAATGGCAAGGTGCAAATGTTTTCCAAATCAGGGGCAAAGTTGCTTAACTGATTTCTCAGTTGGTGTTCCAATTCCCAATATCTCTCTCACTCGAAAGATTGGAGCAGAGTTTGTGGGAACATTCATATTGATATTTGCAGCAACAGCTGGACCCATAGTGAACAACAAGTACAATGGAGCAGAGGGTCTAATGGGAAATGCAGCTACTGCAGGATTAACAGTAATGTTCATCATTCTCTCAATTGGACACATCTCTGGTGCACATCTCAACCCATCACTCACCATTGCATTTGCGACATTCCGCCATTTCCCTTGGACACATGTCCCTGCATACATTGCTGCACAAGTTTCTGCCTCCATCTGTGCTTGTTTTGCTCTCAAAGGTGTCTATCATCCTTACCTCACTGGTGGAGTCACTGTCCCTTCTGTCACCGTCGGCCAAGCTTTCGCAACAGAGTTTATCATCACTTTTATTCTCATGTTTGTAGTCACTGCTGTTGCTACTGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGAGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACTAGTGGTGGTTCCATGAATCCGGTGCGCACCTTGGGTCCAGCCGTTGCAGCAGGAAATTACAAACATATCTGGCTCTATTTGGTGGCACCAACACTCGGTGCTCTTGCTGGTGCAGGCGTTTATACTCTCGTCAAGCTCCATGACTCCAAGGACGAACCACCACGTCAGGTTAGGAGCTTCCGTCGCTAG 900 0.4889 MTEVETASPTAASVPATPETPGGPLFTSLRVDSMSHEQNSFSMARCKCFPNQGQSCLTDFSVGVPIPNISLTRKIGAEFVGTFILIFAATAGPIVNNKYNGAEGLMGNAATAGLTVMFIILSIGHISGAHLNPSLTIAFATFRHFPWTHVPAYIAAQVSASICACFALKGVYHPYLTGGVTVPSVTVGQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWLYLVAPTLGALAGAGVYTLVKLHDSKDEPPRQVRSFRR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0102 299 CDD MIP 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PANTHER AQUAPORIN NIP5-1-RELATED 10 297 - -
Lal12g0102 299 MobiDBLite consensus disorder prediction 1 15 - -
Lal12g0102 299 ProSitePatterns MIP family signature. 130 138 IPR022357 -
Lal12g0102 299 PANTHER AQUAPORIN NIP2-1 10 297 IPR034294 -
Lal12g0102 299 MobiDBLite consensus disorder prediction 1 26 - -
Lal12g0102 299 Pfam Major intrinsic protein 69 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 SUPERFAMILY Aquaporin-like 70 288 IPR023271 -
Lal12g0102 299 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0102 299 Gene3D Glycerol uptake facilitator protein. 66 294 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0102 Lal-Chr12 692934 696427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0102 25 299 Major Intrinsic Protein MIP AT4G10380 74.021 6.20e-149 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0102 K09874 - gmx:100775229 521.931