Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0092 ATGATGATGGCTTCCTCCACCAATTCAATAAAATCAAGATCACTCACTCCCAAACCCCAATTCTCAACAACCAATTCCGTCCCCGATTCCACCCTCCTCGACCCCACTCCTCCTCCTCCTTTATCCTCCAGAACCGTCGACGATGTATGGCGTGATATCGTCGCCGGAGAACGGCGATCGGAGTTCAAGGAGGTGGGTCCCGACGATTATTTGATGACCCTGGAGGATTTCCTGGTGAAGGCGGGTGCCGTGAGCGAAGACGAGGTTGATGATTGTGAAGTGAAGATGCCGATGCCGTTAACTCAGAGGTTGAGCAGTGGTGCAAGCATGTTTGGATATGAGTCTTTGTATCAGAATGGAGTGGAAGGTGGTGGAAGTGGAGATGTTGGTCGAGGGAAGAGAGGGTGCTCTGTTCTGGAGCAGTTGGATAAGGCGGTGCAGCAGAGGCAAAAGAGAATGATTAAGAACAGAGAATCGGCTGCAAGGTCAAGGGAACGCAAACAGGCTTACCAGGTTGAATTGGAGTTGTTAGCGGTTAAACTAGAGGAGGAAAATGACAAGCTTATAAAGGAGAAGGCTGAGAAGAGAAGAGAAAGGTACAAGCAGCTGATGGAAAAAGTAATCCCTATTGTGGAGAAGCGAAAGCCACCTCGTTTACTGCGTAGATTTCACTCCTTGCAGTGGTAG 687 0.4934 MMMASSTNSIKSRSLTPKPQFSTTNSVPDSTLLDPTPPPPLSSRTVDDVWRDIVAGERRSEFKEVGPDDYLMTLEDFLVKAGAVSEDEVDDCEVKMPMPLTQRLSSGASMFGYESLYQNGVEGGGSGDVGRGKRGCSVLEQLDKAVQQRQKRMIKNRESAARSRERKQAYQVELELLAVKLEEENDKLIKEKAEKRRERYKQLMEKVIPIVEKRKPPRLLRRFHSLQW 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0092 228 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Lal12g0092 228 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 36 227 - -
Lal12g0092 228 MobiDBLite consensus disorder prediction 1 46 - -
Lal12g0092 228 SMART brlzneu 144 208 IPR004827 GO:0003700|GO:0006355
Lal12g0092 228 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 198 IPR004827 GO:0003700|GO:0006355
Lal12g0092 228 MobiDBLite consensus disorder prediction 1 31 - -
Lal12g0092 228 Gene3D - 146 201 - -
Lal12g0092 228 Pfam bZIP transcription factor 148 205 IPR004827 GO:0003700|GO:0006355
Lal12g0092 228 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 227 IPR043452 GO:0003700|GO:0045893
Lal12g0092 228 Coils Coil 167 198 - -
Lal12g0092 228 SUPERFAMILY Leucine zipper domain 148 199 IPR046347 GO:0003700|GO:0006355
Lal12g0092 228 CDD bZIP_plant_BZIP46 148 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0092 Lal-Chr12 623674 626255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0092 42 228 bZIP Transcription Factor Family AT1G03970 55.670 2.13e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal12g0092 bZIP_1 1.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0092 K14432 - gmx:100808917 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0092 12 623674 626255 Lal12g0092 12 623674 626255 ECH
Lal12g0092 12 623674 626255 Lal24g0078 24 500161 507342 LSH