Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0086 ATGGTGAAGCTTCTGATTACGGGTGTTTCTTATATCTGCGAGGATGGAATTTCTGATGGCAACGGCAGAGGAAGAAGAAAATATGTGTTTCTACAGAAAAAAGGCAAGTGGAAATCTATTGCAAAAGTCATGGCTGAAAGGGGATATCATGTTTCACCTCAGCAGTGTGAGGACAAGTTCAACGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTTGGACGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCTCTGTTGGATTTAATAGATTATCTTTCCGAGAAAGAAAAGGATGATGTTCACAAAATATTAAGCTCAAAACACCTGTTCTATGAAGAGTTAGCTCTCCGAAATAGAGACGATCATGATAATGATGATACAAGAAGGTCCCACCATGATGACCATGATGAAGATGATCAAGAAGTTGAAGTTGATGGTCACAATGACTTTGAAGAGAATTATGCTTCTCATGGAGACACTAGAGGAATATATGGGCCATTAGAGGGGTCTATGAAGAAGAAATTGAAACAATGTCAAGGCCATGAAGATGCTTCTACTTTTGTTAATCCCTTAAGCTGTCAGGACCACAACAAACATGCATATACCCATGGACAGATGGTCCAATCAGGTACGAATCAAGTTTTACCTAAAGGCACGGAAGCAGCTTGGTTACAGAAGCAATGGTTTGAATCTCACTCACTTCAATTAGAAGAACAGAAGCTACAACTTCAGTCTGAGATGTTGGAACTAGAGGAGCAGAGACTCAAGTGGCAGAGGTTTAGTAAGAAGAAGGAGCAGGAGCTGGAGAAGCTATGTTTCGAAAATGAACGGCTGAAGCCCGAAAATGAACACATTTCTTTATAA 873 0.3986 MVKLLITGVSYICEDGISDGNGRGRRKYVFLQKKGKWKSIAKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDLIDYLSEKEKDDVHKILSSKHLFYEELALRNRDDHDNDDTRRSHHDDHDEDDQEVEVDGHNDFEENYASHGDTRGIYGPLEGSMKKKLKQCQGHEDASTFVNPLSCQDHNKHAYTHGQMVQSGTNQVLPKGTEAAWLQKQWFESHSLQLEEQKLQLQSEMLELEEQRLKWQRFSKKKEQELEKLCFENERLKPENEHISL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0086 290 PANTHER FACTOR, PUTATIVE-RELATED 117 289 - -
Lal12g0086 290 PANTHER FACTOR, PUTATIVE-RELATED 1 117 - -
Lal12g0086 290 Pfam Myb/SANT-like DNA-binding domain 2 84 IPR044822 -
Lal12g0086 290 MobiDBLite consensus disorder prediction 123 146 - -
Lal12g0086 290 PANTHER F16F4.11 PROTEIN-RELATED 1 117 - -
Lal12g0086 290 PANTHER F16F4.11 PROTEIN-RELATED 117 289 - -
Lal12g0086 290 Coils Coil 236 259 - -
Lal12g0086 290 MobiDBLite consensus disorder prediction 123 140 - -
Lal12g0086 290 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0086 Lal-Chr12 588091 589036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal12g0086 Myb_DNA-bind_4 2.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0086 - - gmx:100812134 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0086 12 588091 589036 Lal12g0086 12 588091 589036 ECH
Lal12g0086 12 588091 589036 Lal24g0071 24 438591 441682 LSH
Lal2g0981 2 6629912 6635667 Lal12g0086 12 588091 589036 PCT
Lal9g0861 9 6384814 6388393 Lal12g0086 12 588091 589036 PCT
Lal12g0086 12 588091 589036 Lal2g0981 2 6629912 6635667 PCT
Lal12g0086 12 588091 589036 Lal9g0861 9 6384814 6388393 PCT