Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0082 ATGGGGAAGAAGAAGCCCACGGCCCGCGGCCACGACGACATCCCACCTGCGCCATCTCAGGGCGGCGGCGGTAAATCTAAGAAGAAGGTTGTCATCGATGATGATGAGTATGCTATTGCACCCGAGCTCGCTGAGGAGCCCAAGGTTCAGGAAGAGAAGCCTGTTGGGAAGAAGAAAGGTAAGAAAGGTAATGCTAAAGTTGCTAAGGATGATGATGATGATGATTATGTCATAGTTGGTGATGATAATGATGATGTGCCTGAAGTTGTGTTTTCTGGGAAGAAGAAGGGCAAATCCAAAAAGGATAGTGGTGCTGGGGGGAGTTTGTTTGCTTTACTCGGTGAAGAGGAGGGTGGTGATGATGATGGCGGTAGTGGAGAGAAATCTGAGGAGGATGAACCTGTTGTTAGTTTTACGGGTAAGAAGAAATCCTCCAAGGGCTCGAAGAAAAGTGGTGGTAGTTTGTTCTCTCCATCTGCATTTGATGCTATTGATGATGACAATGATGGTGAGGCTGATGATGGTAGGGATGAGAATGATGATGTTGATGAACCCGTTATTGCTTTTACGGGGAAGAAGAAGTCTTCAAAAGGAAGCAAAAAGGGTGGTTCTTTGTTTTCCGCAGCTGGTTTGGTTGAGAATGATGATGAGCAGGATGCTAAGAATGAGAAGGAAGAAGATGATGAAGACGATGAAGACATAGGACCAATCATTTTCTCAGGTAAGAAGAAGTCATCAAAATCTTCTAAGAAGGCTGTAAATTCACTTGAGGATATTGTTTCTGTTCCCGAGGCAGATAATATTGGTGATGAAAAAGATGAGGAGGATGTTTCTTTAGTTGCATTTTCAGGTAAAAAGAAGTCTTCTAAAAAGAAAAGCAGTAGTGCTACTACCAAAGTGAGTGATGAAATTGGGTCTGTGAGTGAAAGTGTGGATGTGGTTGAGCCTGAGCAACCTAGTCTTGGAATTAGTAATAAGAGTGAAGTGGTCGCTGAAACATCCAAAAGTAAGAAGAAGAAGAATAAGAAGAGTGGAAGAACTGCTCAAGAGGAGGACGATTTGGACAAGATTCTTGCAGAACTTGGTGAGGCCCCTCCAGTAGCAAAACCGGTTTCTCCTCCACCACTGGATGATAAAGTTCAGCCTCCTCCTGAAGTAGGTTCTGCTGCTGACCCTTCAGGTGAAAAGGAGGGGGATGAGGAGACAGTGGAGACAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCTGCTGCGGTGGCTGGAAGTGCACCAGAAGAAGTTCAAACTGAGACAATTGAGTCAAAGAAGAAAGATTTGAAGACTAAAGTGGCTGACAAGAAAGTGCCAAAGCATGTCAGAGAGATGCAAGAGGCACTTGCTCGAAGGCAAGAGGCTGAAGAGAGGAAGAGAAGAGAAGAGGAGGAGAGGTTAAGGAAGGAAGAAGAGGAGAGGATAAGGAAGGAAGAAGAGGAGAGACAGGCAGAAGAGGCTAGACGCAGAAAGAAGGAAAGAGAAAAAGAAAAACTACTGAAAAAGAAGCAGGAAGGTAAACTATTGACTGGTAAACAGAAGGAAGAAGCTCGCCGTTTGGAGGCAATGAGGAAGCAGTTTCTTAATAGCACAGGGAGTGTGACACTTCCTGCTGGGGAATCTGCCACAACATCCAAAAGACCCATATACAAGACAAAGAAGTCAAAACCAAACCATCATCATCAGAATGGTTCTGCTGCTGCTGTTGAGACAGCTGAAAGTGCTGAAGCAAAGGGAAATCAGGAGGCTGCCACTAATTTAGGTTCAGAGAAACCGGAAAAGGTTGAAGTGGAATCGATGCTGGTGGAGGACAAAGTTGAACTTTCTGAACCTATTGTAGAGGATGCAGCAGAAGATGAAGATGATGAGTGGGATGCAAAAAGCTGGGATGATCTTAATCTAAATGCCAAAGGCGCATTTGCTGATGAAGAGCCTGACTCAGAGCCTGAACCTGTAGTCAAGAAGGAGCTAAAAAGTGCTGGTGCTACTAAGAAAACTGTTTCTAAGCCCGTGGCTGAAGAAATTGAAGATAGAAAACCGGCTAACGTTGTGGTTGTGGAAAAAAGTAAAAAGCATGACCTGGACTCTAGAAGGGAACCACCAAACTCTGCTGTGCCTCCTAAGGCGGGTGAAGAGAACCTGCGCTCTCCAATTTGCTGTATCATGGGGCATGTTGACACTGGCAAAACCAAGTTGCTGGATTGTATTCGAGGTACTAATGTCCAGGAGGGTGAGGCTGGTGGTATCACACAGCAGATCGGTGCGACATTCTTTCCTGCTGAGAACATACGTGAAAGAACAAAAGAGTTGAAAGCTGATGCAAAGCTGAAAGTTCCCGGTCTACTGGTTATTGATACACCAGGGCACGAATCGTTTACCAACTTAAGGTCTCGTGGTTCTGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTGGAGCCACAAACAATAGAATCACTCAATCTATTAAAAATGAGAAATACAGAATTCATCATTGCCTTGAATAAGGTTGACAGACTTTATGGATGGAAAACATGCCGCAATTCTCCAATTGTTAAAGCAATGAAGCAGCAGACTAAGGACGTTCAAAATGAGTTCAATATGAGGCTTACTCAGATTATTACTCAATTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAACAAGGAAATGGGTGAAACATTCAGTATTGTACCTACTAGTGCAATAAGCGGTGAAGGAATCCCTGATATGCTATTACTGTTGGTTAATTGGACCCAAAAAACAATGGTTGAGAAACTTACATATAGCGATGAAGTGCAGTGTACTGTTTTGGAGGTCAAGGTTGTTGAAGGTCATGGAACCACTATTGATGTTGTTTTAGTTAACGGTGTTCTTCATGAAGGAGATCAAATAGTTAGTCCAATTGTCACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGTACATATGTTCATCATAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACAGCCCAGGGGCTTGAAAATGCTATTGCTGGCACTGCGTTATATGTGGTGAAGCCTGGTGATGATGTGGAAGATTTTATAGAAGCAGCTGAGGAGGATATGAATTCAGTCATGAGCAGGATTGATAGGAGTGGTGAAGGAGTTTGTGTACAGGCATCTACACTTGGTTCATTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGCATAAGCATAGGCCCTGTACATAAAAAAGATGTAATGAAGGCAAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGATGATTTGGGTGTGAAAGTTTTTATTGCTGATATCATTTATCATCTGTTTGATCAATTTAAGGCCTATATTGACAACATTAAGGAGGAGAAAAAGAGAGAAGCTGCTGATGAGGCAGTATTCCCATGTGTTCTGAGAACTTTACCAAATTGTGTTTTCAACAAGAAGGATCCAATTGTTTTAGGAGTTGATATCCTTGAAGGCATTTTAAAGATCGGGACACCAATTTGTATTCCGTCCAGAGAGTTCATTGATATTGGTCGCATTGCCTCTATCGAGAATAACCATAAACCTGTTGATTTTGCTAAAAAGGGGCAGAAAGTAGCAATAAAGATTGTTGGCAGTAATTCCGAAGAGCAACAAAAAATGTTTGGGAGACATTTCGAGATAGATGATGAACTTGTAAGCCATATTTCAAGGAGTTCTATTGATGTACTCAAAGCTAATTATCGGGATGATTTGTCCACGGAGGAATGGAGACTAGTTGTGAAATTGAAGGCTGTTTTCAAGATACAATGA 3969 0.4245 MGKKKPTARGHDDIPPAPSQGGGGKSKKKVVIDDDEYAIAPELAEEPKVQEEKPVGKKKGKKGNAKVAKDDDDDDYVIVGDDNDDVPEVVFSGKKKGKSKKDSGAGGSLFALLGEEEGGDDDGGSGEKSEEDEPVVSFTGKKKSSKGSKKSGGSLFSPSAFDAIDDDNDGEADDGRDENDDVDEPVIAFTGKKKSSKGSKKGGSLFSAAGLVENDDEQDAKNEKEEDDEDDEDIGPIIFSGKKKSSKSSKKAVNSLEDIVSVPEADNIGDEKDEEDVSLVAFSGKKKSSKKKSSSATTKVSDEIGSVSESVDVVEPEQPSLGISNKSEVVAETSKSKKKKNKKSGRTAQEEDDLDKILAELGEAPPVAKPVSPPPLDDKVQPPPEVGSAADPSGEKEGDEETVETAAAKKKKKKKEKEKEKKAAAAAAAVAGSAPEEVQTETIESKKKDLKTKVADKKVPKHVREMQEALARRQEAEERKRREEEERLRKEEEERIRKEEEERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRKQFLNSTGSVTLPAGESATTSKRPIYKTKKSKPNHHHQNGSAAAVETAESAEAKGNQEAATNLGSEKPEKVEVESMLVEDKVELSEPIVEDAAEDEDDEWDAKSWDDLNLNAKGAFADEEPDSEPEPVVKKELKSAGATKKTVSKPVAEEIEDRKPANVVVVEKSKKHDLDSRREPPNSAVPPKAGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATFFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIIALNKVDRLYGWKTCRNSPIVKAMKQQTKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVNWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVSPIVTTIRALLTPHPMKELRVKGTYVHHKEIKAAMGIKITAQGLENAIAGTALYVVKPGDDVEDFIEAAEEDMNSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADDLGVKVFIADIIYHLFDQFKAYIDNIKEEKKREAADEAVFPCVLRTLPNCVFNKKDPIVLGVDILEGILKIGTPICIPSREFIDIGRIASIENNHKPVDFAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRSSIDVLKANYRDDLSTEEWRLVVKLKAVFKIQ 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0082 1322 MobiDBLite consensus disorder prediction 610 633 - -
Lal12g0082 1322 TIGRFAM small_GTP: small GTP-binding protein domain 740 866 IPR005225 GO:0005525
Lal12g0082 1322 Coils Coil 400 428 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 367 381 - -
Lal12g0082 1322 Gene3D Translation factors 958 1071 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 547 569 - -
Lal12g0082 1322 CDD aeIF5B_II 959 1064 - -
Lal12g0082 1322 Pfam Translation-initiation factor 2 1061 1171 IPR023115 -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 27 73 - -
Lal12g0082 1322 Coils Coil 459 525 - -
Lal12g0082 1322 Gene3D - 729 957 IPR027417 -
Lal12g0082 1322 Gene3D - 1072 1178 IPR036925 -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 87 102 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 1 647 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 392 411 - -
Lal12g0082 1322 CDD IF2_eIF5B 738 948 - -
Lal12g0082 1322 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1055 1184 IPR036925 -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 219 234 - -
Lal12g0082 1322 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1322 - -
Lal12g0082 1322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 1021 IPR027417 -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 662 680 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 440 544 - -
Lal12g0082 1322 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1322 IPR015760 -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 344 359 - -
Lal12g0082 1322 Gene3D Translation factors 1185 1322 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 164 181 - -
Lal12g0082 1322 MobiDBLite consensus disorder prediction 660 680 - -
Lal12g0082 1322 CDD IF2_aeIF5B_IV 1193 1288 - -
Lal12g0082 1322 Pfam Elongation factor Tu GTP binding domain 739 946 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 Pfam Elongation factor Tu domain 2 974 1047 IPR004161 GO:0005525
Lal12g0082 1322 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 735 951 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 SUPERFAMILY Translation proteins 1189 1321 IPR009000 -
Lal12g0082 1322 PRINTS GTP-binding elongation factor signature 739 752 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 PRINTS GTP-binding elongation factor signature 803 813 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 PRINTS GTP-binding elongation factor signature 819 830 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 PRINTS GTP-binding elongation factor signature 855 864 IPR000795 GO:0003924|GO:0005525
Lal12g0082 1322 MobiDBLite consensus disorder prediction 709 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0082 Lal-Chr12 565306 572893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0082 1 1322 Eukaryotic Initiation Factors Gene Family AT1G76810 60.892 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0082 K03243 - gmx:100814640 1497.26