Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0077 ATGGAGGGTTTTTGGAACATATTTTGTGGGGAATCTAGTTGTTCAAAGGGTGGAGGAAAGCAATGCAGTTTTGATTTCAAGTTTTCGATTGATCCTTTCACATGTATCAATAATTTGCTTATCATTTGCATTGATGTGTTACTACTGAGCATGATCTCATTCACATTGATCAAGAAGTCGAATCATAAACCATTTCCGCGTCTAATGCGGTTGCAAAGTTATTCAAAATTGCACCTAGTGTCTGCTATAGCCAATGGCTCTCTGGGGCTGATACATCTGTGCTCAGGTATCTGGCTTTTAGAGGAGAGTCTGAGGAAAACTGGAACAGCTTTGCCTCTTGATTGGTGGTTGCTAGAATTCATTCAAGGGTTGACTTGGTTGCTATTGTGTTTAACAATAAGTCTTAAGCTTAATCAACTTCCAAGAGCATGGTTACTGCTGTTTTCTGTTCTTATCTCATTGGTTTCTGGCATTCTCTGTGTCCTATCTTTGTTTTATGTAATTAGTAGCAATGATCTGTCTCTGAAAGTAGCTTTAGATGTTCTATCATTTCCAGGGGCAGTTTTATTGCTATTATGCATTTACAAGGAATCTAAGTATGGAGACATTGATAGAGAAAATCATGAAAGCCTTTATGCTCCTTTAAATGATGAGTCCAATATTATTGATTCTATTAGCTATGTTACACTATTTTCCAGAGGTGGATTCTTCAATAGGATGTCATTTTGGTGGCTGAGTCCATTGATGAAAAGGGGTAGAGAGAAAACACTTCAGGATGAAGATATTCCAAAGTTGCGGGAGGCCGATCGCGCAGAAAGTTGTTATTTGATGTTTCTTGACCAATTCAACAGACAGAAACAGAAAGAGTTATCATCACAGCCATCAATTTTGAGGACAATAATTATGTGCCACTGGAAAGAAATTTTGATATCAGGATTCTTTGCATTGCTGAAGGTAATTACCCTCTCATGTGGTCCTTTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTCATGAGAGTTTCAAATATGAAGGTTATGTATTAACCATTTCTCTGGTCTTTACAAAGATCATAGAATCCCTATCACAAAGGCAGTGGTACTTCCGCACCAGACTAATTGGTTTGAAAGTTAGGTCACTGCTTATTGCAGCAATTTATAAAAAGCAACTGAGGCTATCCAATTCTGCTAGATTGATGCACTCAGGTGGTGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAGTTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCGTCCAGCTATGTATTGCGTTAGTAGTACTTTATCGTGCCGTAGGACTAGCAACAATTGCCACATTGGTGGTGATAGCTCTCACTGTGCTTTGCAATACTCCACTTGCAAAGTTACAGCATAAGTTTCAGAGAAAACTAATGGAGGCACAAGATGAGAGATTGAAGGCCAGTTCTGAAGCTCTTGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAAACCAACTTCAGAAATGCTATAGAAAGATTAAGGAATGTTGAGCTCAAAAGATTGTCTGTAGTGCAATTAAGAAGGGCATATAGCAACTTTCTTTTTTGGGCCTCTCCTGTTTTGGTCTCTGCAGCTTCCTTTGGTGCATGCTACCTTCTTGATGTTCCATTACATGCAAATAATGTTTTCACTTTTGTGGCAACGTTACGCCTAGTTCAAGATCCAATTAGAACCATCCCAGATGTTCTTGGTGTTGTCATTCAAGCAAAGGTTGCATTGACCAGGATTGTGAAATTTCTTGAGGCACCTGAATTAAACAGTGAAAATGTGAGGAAGAGGTATTTAAATGATCATAATAGGGGCTCGATTTTAATCAATTCTGCTGACTTTTCGTGGGAAGATAATGTAACAAAGGCAACTCTGAGAAACATGAATTTAGACATTAGACCAGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCATCTTAGCATCAATTCTCAGAGAAGTTCCTCATACTCGCGGAACTATTGAAGTTTATGGGAAATTTGCCTATGTTTCTCAAACAGCATGGATACAGACGGGTACAATAAGGGAAAATATACTGTTTGGATCAACTATGGATTCTCAAAGATATCAAGAAACACTTCATAGGTCTTCACTACTGAAGGACCTTGAACTATTTCCCCATGGTGACCTCACAGAAATAGGGGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAACAGCGGATTCAACTTGCTCGTGCTCTTTATCAAAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACAGCAACAAATTTATTTAAGTTTATAATGTTCTTCACTAAAGATGGCTTTGAAACTTGGCAGGAATACATCATGGAAGGACTTGCAGAGAAAACAGTCTTGCTTGTAACTCATCAAGTTGATTTTCTTCCAGCATTTGACACTGTTTTGTTGATGTCTGATGGGGAAATCCTACAAGCTGCTCCTTATTACCATCTTCTTACCTCAAGCCAAGAGTTTCAGGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCGGACCGGCTTGTGGATGTTACTCCTTCTCATAAACTTTCAAATACTGCTGGAGAGATTACAAAAACATATATAGAGAAGCAGTATGAAGCTTCATCACAAGGAGATCAATTAATTAAGAAAGAAGAGAGAGAAAAAGGAGATAGAGGGTTCAAGCCTTACTTGCAGTATCTGGATCAAAACAAAGGATACATATACTTCTCTGTGGCTGTTCTTTCCCACTTTACATTTGTGATTGGCCAGATATTGCAAAACTTATGGATGGCAACTAATGTTGACAATCCTCATGTCAGCTTGTTGCAGTTGATTGTAGTTTACTTGTTGATTGGATTTATTTCAACATTTTTCTTGTTGATCAGAAGTATTGTTGCAGTTGATATGGGTCTTCAATCATCAAAATCGATGTTTTTACAGCTACTGAACTCCCTTTTTCGTGCACCTGTATCCTTTTATGACTCGACACCATTAGGAAGGATACTTAGTAGGGTCTCCTCGGATTTGAGCATTGTCGATCTTGATGTCCCATTCAGCCTTGTTTTTGCTGTGGGAGCTACTGCAACTTGTTATTCAAATCTTACAGTTTTAGCAGTCATTACATGGCAAGTCTTGTTTGTCTCTATACCAATGGTTTACATTGCAATTCGCTTGCAGAGATACTACTTTGCCACCTCAAAAGAATTGATGCGGCTGAATGGCACAACAAAGTCCCTTGTAGCTAACCATCTAGCTGAATCTGTTGCTGGAGCTATAACAATAAGGGCTTTCGAGGAGGAAGATCGTTTTTTTGCGAAGAACCTTGATCTCATTGACGTCAATGCTAGTCCTTTCTTCCATAGTTTTGCAGCAAACGAGTGGTTGATGCTACGGTTAGAAACAATAAGTGCAGTTGTTTTTGCAGCCGTGGCACTTTCCATGGTGGTACTTCCACCTGGGACTTTCACCTCTGGATTTATCGGCATGGCTATCTCTTATGGCCTTTCATTAAACACTTCCCTAGTATTTGCAATTCAAAATCAATGCACTATAACAAATCAAATAATATCAGTGGAGAGGCTAAATCAATACATGCACATACCAAGTGAAGCACCAGAAGTAATAGAAGGAAATCGTCCTCGTGCGAATTGGCCAGTTGCTGGAAAAGTAGAAATTCATGATTTGAAGATACGATATCGGGTTGATGCACCCCTTGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTAGGCAGAACAGGTAGTGGAAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGATAGTGGAAAAATAATAGTTGATGGCATAGACATTTCTTCTATTGGACTTCATGATTTGAGGTCACACTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCAGATATAATTTAGACCCATTATCTCAACACTCTGATCAGGATATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAGGTTGTCCAAGAGAAAGAAAACGGATTAGACTCCTCAGTTGTTGAAGCTGGGGCAAACTGGAGCATGGGACAGCGACAATTGTTCTGTTTGGGACGCGCTCTCTTGAGGAAAAGTCGAGTATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACTGATCTGATTCTGCAGAAAACAATTAGGACTGAGTTTGCAGATTGCACTGTAATCACAGTAGCCCACAGGATACCAACTGTGATGGATTGCACCAAGGTTGCTGCCATCAGTGATGGGGAACTGGTAGAGTATGATGAGCCAGTGAATTTGATGAAGAGTGAAGGATCCTTATTTGGACAGCTTGTCAAAGAGTACTGGTCTCATTTTCAGTCTGCAGAATCACACTGA 4485 0.3987 MEGFWNIFCGESSCSKGGGKQCSFDFKFSIDPFTCINNLLIICIDVLLLSMISFTLIKKSNHKPFPRLMRLQSYSKLHLVSAIANGSLGLIHLCSGIWLLEESLRKTGTALPLDWWLLEFIQGLTWLLLCLTISLKLNQLPRAWLLLFSVLISLVSGILCVLSLFYVISSNDLSLKVALDVLSFPGAVLLLLCIYKESKYGDIDRENHESLYAPLNDESNIIDSISYVTLFSRGGFFNRMSFWWLSPLMKRGREKTLQDEDIPKLREADRAESCYLMFLDQFNRQKQKELSSQPSILRTIIMCHWKEILISGFFALLKVITLSCGPLLLNSFILVAEGHESFKYEGYVLTISLVFTKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYKKQLRLSNSARLMHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLYRAVGLATIATLVVIALTVLCNTPLAKLQHKFQRKLMEAQDERLKASSEALVNMKVLKLYAWETNFRNAIERLRNVELKRLSVVQLRRAYSNFLFWASPVLVSAASFGACYLLDVPLHANNVFTFVATLRLVQDPIRTIPDVLGVVIQAKVALTRIVKFLEAPELNSENVRKRYLNDHNRGSILINSADFSWEDNVTKATLRNMNLDIRPGQKVAICGEVGSGKSTILASILREVPHTRGTIEVYGKFAYVSQTAWIQTGTIRENILFGSTMDSQRYQETLHRSSLLKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKFIMFFTKDGFETWQEYIMEGLAEKTVLLVTHQVDFLPAFDTVLLMSDGEILQAAPYYHLLTSSQEFQDLVNAHKETAGSDRLVDVTPSHKLSNTAGEITKTYIEKQYEASSQGDQLIKKEEREKGDRGFKPYLQYLDQNKGYIYFSVAVLSHFTFVIGQILQNLWMATNVDNPHVSLLQLIVVYLLIGFISTFFLLIRSIVAVDMGLQSSKSMFLQLLNSLFRAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATATCYSNLTVLAVITWQVLFVSIPMVYIAIRLQRYYFATSKELMRLNGTTKSLVANHLAESVAGAITIRAFEEEDRFFAKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAVALSMVVLPPGTFTSGFIGMAISYGLSLNTSLVFAIQNQCTITNQIISVERLNQYMHIPSEAPEVIEGNRPRANWPVAGKVEIHDLKIRYRVDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPDSGKIIVDGIDISSIGLHDLRSHFGIIPQDPTLFNGTVRYNLDPLSQHSDQDIWEVLGKCQLREVVQEKENGLDSSVVEAGANWSMGQRQLFCLGRALLRKSRVLVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGELVEYDEPVNLMKSEGSLFGQLVKEYWSHFQSAESH 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0077 1494 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Lal12g0077 1494 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Lal12g0077 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1475 IPR027417 -
Lal12g0077 1494 SUPERFAMILY ABC transporter transmembrane region 297 605 IPR036640 GO:0005524|GO:0016021
Lal12g0077 1494 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1494 - -
Lal12g0077 1494 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Lal12g0077 1494 SUPERFAMILY ABC transporter transmembrane region 922 1230 IPR036640 GO:0005524|GO:0016021
Lal12g0077 1494 Gene3D - 622 868 IPR027417 -
Lal12g0077 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1482 IPR003439 GO:0005524
Lal12g0077 1494 Gene3D ABC transporter type 1, transmembrane domain 897 1229 IPR036640 GO:0005524|GO:0016021
Lal12g0077 1494 Gene3D - 1232 1483 IPR027417 -
Lal12g0077 1494 CDD ABCC_MRP_domain2 1246 1466 - -
Lal12g0077 1494 SMART AAA_5 1274 1459 IPR003593 -
Lal12g0077 1494 SMART AAA_5 651 838 IPR003593 -
Lal12g0077 1494 Gene3D ABC transporter type 1, transmembrane domain 297 605 IPR036640 GO:0005524|GO:0016021
Lal12g0077 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0077 1494 CDD ABC_6TM_ABCC_D2 930 1223 IPR044726 GO:0140359
Lal12g0077 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 861 IPR003439 GO:0005524
Lal12g0077 1494 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lal12g0077 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 861 IPR027417 -
Lal12g0077 1494 CDD ABCC_MRP_domain1 624 838 - -
Lal12g0077 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0077 1494 Pfam ABC transporter transmembrane region 309 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0077 1494 Pfam ABC transporter transmembrane region 932 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0077 1494 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0077 Lal-Chr12 497529 504390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0077 596 887 Calmodulin-binding Proteins AT2G36910 26.282 4.70e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0077 K05666 - gmx:100784336 2450.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0077 12 497529 504390 Lal12g0077 12 497529 504390 ECH