Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0076 ATGAACATGGAGGGTTTTTGGAGCATGTTTTGTGGGGACTATGGATGTTCAGAAACTGGAGGAAAGCCTTGCAGCTACAATTTTGTTGATCCTTCCACTTGTGTCAACCATTTACTTATAATTTGCATTGATTTGTTACTGCTTCTGATGATCTTGTTCATTATGATCAAGAAGTCATCCTCACAACCATATCAGGGTGGAATCCAGCTGCAAAGATATTCAAATTTGCAGCTACTTTCTGCCATTGCCAATGCCACTCTTGGCTTGGTGTATCTGTGCTTAGGCATTTGGGTTTTAGAGGAGAAATGGAGGAAAACCCAAACTGCATTGCCTCTTAATTTATGGCTTCTAGAATTCATTCAGGGATTGACATGGTTGTTAGTGGGTTTAGCAATGAGCCTTCAGGTTAAACACCTTTCAAGAGCATGGTTGAAGGTGTTTTCTATTCTAATCTTTTTGGTTTCTGGTATTTTCTGTGCTTCGTCATTGTTTTATGCAATTAGAAGTAGAGAACTGACCCTTAAGGTAGCTTTAGATGTTCTCTCATTTCCAGGGGCAATGTTATTGCTATTATGCACATATAAGGAATCTAACCATGAGGACACTTACAGAGAAATTGATGAAAGCCTTTATGCCCCTTTAAATGGTGATTCCAATAAAATTGATTCTATTGACAATGTAACCCTGTTTGCCAAAGCTGGATTCTTCAATAGGATGTCATTTTGGTGGTTGAATTCATTGATGAAAAGGGGTAAAGAGAAATCACTTCAGGAGGAAGATGTGCCAAAGTTGCGGGAGGATGATCGAGCGGAAAGCTGTTATGTTTTGTTTCTAGACCAGTTGAACAGGCATAAACAGAAGGGTCAGTCTTTGCAACCATCAGTTTTGAAGACAATAGTTTTATGCCATTGGAGAGAGATTTTGATATCAGGATTCTTTGCATTGCTTAAGGTACTAGCTGTGTGTTGTGGACCTCTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTTTGCATTGGTCATATCTCTTTTTGTTATAAAGATCATAGAATCTTTGTCACAGAGGCAGTGGTATTTCCGCTCCAGACTTATTGGTCTGAAAGTTAGATCACTACTAACTGCAGCCATTTATAAAAAGCAAATTAAGTTATCCAATTCTGCTAGATTGACGCATTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGTGTCCAGCTATGTATCTCATTAGTATTACTTATTAATGCTGTTGGGTTAGCAACAATTGCCTCGCTGGTGGTGGTAGTTGTCACTGTGCTTTGCAATACTCCACTCGCAAAGTTGCAGCACAAGTTTCAAAGCAAACTTATGGTGTCACAAGATGCAAGATTGAAAGCTAGTTCTGAGGCTCTAGTGAATATGAAGGTGTTGAAGTTGTACGCATGGGAAACCAGTTTTAAAAATTCTATAGAAGCATTGCGGGATGTGGAAGTCAAATGGTTGTCAGCAGTGCAATTACGAAAGGCATACAACTCCTTTCTATTTTGGTCCTCACCTGTTTTGGTCTCAGCTGCTACCTTTGGGGCATGTTACTTTCTTAATGTTCCTTTACATGCAAACAATGTTTTCACTTTTGTAGCTTCTTTACGCCTTGTTCAAGATCCTATTAGAACAATTCCTGATGTTATTGGGGTGGTGATTCAGGCAAAAGTTGCCTTTGCCAGGATTACAAAATTCCTTGAGGCACCCGAATTGCAGAACTCAAATGTGAAGAAGAGCTGTTTTAATGACAATGTGAGGGGCTCAATTTTAATCAAGTATGCTGACTTTTCATGGGAAGATAATTTCTCAAATCCAACATTGAATGACATAAATTTGGAGGTTAGAGCAGGGCAAAAGGTGGCAATTTGTGGAGAGGTTGGCTCGGGCAAATCAACCCTTTTAGCAGCAATTCTCAGAGAAGTTCCTAATACTCGGGGGACTATTGATGCTTATGGGAAGTTAGCTTATGTTTCTCAAACAGCATGGATTCAGACAGGTACAATACAGGAAAATGTACTGTTTGGATCAGATATGGATCCTCAAAGATATCAAGAAACACTTCATAGGTCTTCACTAGTGAAGGACCTTGAACTCTTTCCCCATGGTGATCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGGATTCAACTTGCTCGTGCTCTTTATCAAAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACAGCGACACATTTATTTAATGAATACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACACATCAAGTTGACTTCCTTCCAGCATTTGACACTGTTTTGTTGATGTCAGGTGGGAAAATCCTGGAAGCTGCTCCTTATGACCACCTTTTGACCTCAAGCCAAGAGTTTGAGGACCTTGTCAATGCTCACAAAGAAACGGCTGGTTCTGACCGTCCTCTGGATGTTACCTCTTCCCATAGGCCTTCAAATACTACTGGAGAGATTAAGAAAACATCTATGGAGAATCAGTTTGAAGCATCACAAGGTGATCAACTAATTAAGAAAGAAGAGAAAGAAAAAGGAGACCAGGGGTTCAAGCCTTATTTGCAGTATCTGAATCAGAATAGAGGATATATATACTTTGTTGTGGCTGCTCTTTCTCACCTTATATTTGTGATTGGCCAAATATTGCAAAACTCATGGATGGCTGCTTATGTTGACAATCCTGAAGTCAGTACTTTGCGATTGATTGTAGTATACTTGTTGATGGGAGTTATTTCAACATCGATCTTGTTGATCAGATCTCTTGCAACAGTTGCTTTGGGCATTCAATCATCAAAATCATTATTTTTACAGCTACTGAACTCCCTCTTTCGTGCGCCCATGTCATTTTATGACTCCACACCTTTGGGACGGATACTTAGTAGAGTCTCCTCAGATCTCAGCATTCTCGATCTTGATATCCCATTTGGCTTTGTTTTTGCGGTTGGAGCTACTATCAATTGTTATGCTAATCTTACAGTTTTAGCAGTTGTTACCTGGCAAGTCTTGTTTGTTTCTATTCCAATGATTTATTTTGCAATTCGCTTGCAGAAATACTACTTTGCCACCGCAAAAGAATTGATGAGGTTGAATGGCACAACAAAATCATTTGTAGCTAATCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGGGGAGGAAGATCGTTTCTTCATGAAGAATCTTGATCTAATTGATGTTAATGCTAGTCCTTACTTTCACAGTTTTGCTGCAAATGAGTGGTTAATTCAACGATTAGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCAGCACTTTGCATGGTTCTACTTCCACCTGGAACTTTCTCCCCTGGCGATATTCTAATTTCAACTTCTGATTTTATTACAGGTTTTATTGGCATGGCTCTCTCTTATGGACTTTCGCTTAATATGTCCCTAGTATTTTCAATTCAAAATCAATGCAATATATCAAATTATATAATATCAGTTGAGAGGCTAAACCAATATATGCATATACCAAGTGAGGCACCAGAAGTAATAGAAGGAAATCGTCCTCCCGTGAATTGGCCAGTTGTGGGAAAAGTAGAAATACACGATTTGCAGATACGATATAGGCCTGATGCACCTCTTGTACTCCATGGCATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGAACAGGTAGTGGAAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAACCAGCTTCTGGGAAAATCATAGTTGATGGCATAGACATTTCTTCTATTGGACTTCATGATTTGAGATCGCGCTTTGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCAGATATAATATGGACCCGTTATCTCAACACTCTGATCAAGAGATATGGGAGTACAAGTGGACTAATTGTAGCTTCCATGTGAAGGTTCTTGGGAAGTGTCAATTGCTGGAGGTTGTCCAAGAGAAGGAAGAAGGCTTAGACTCCTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGGCAGTTATTCTGTTTAGGGCGTGCTCTTTTGCGTAGAAGTCGGGTTTTGGTACTTGATGAAGCGACTGCATCAATTGATAATGCAACTGACTTGATTCTTCAGAAGACCATTAGAACCGAGTTTTCAGATTGCACAGTAATCACAGTTGCTCATAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCTATCAGCGATGGGAAAGTGGAAGAGTATGATGAGCCATCAAAGTTGATGAAGAGAGAAGGGTCATTATTTGGGCAGCTTGTAAAGGAATACTGGTCTCATTTTCAGTCTGCAGATTCACATTGA 4506 0.4008 MNMEGFWSMFCGDYGCSETGGKPCSYNFVDPSTCVNHLLIICIDLLLLLMILFIMIKKSSSQPYQGGIQLQRYSNLQLLSAIANATLGLVYLCLGIWVLEEKWRKTQTALPLNLWLLEFIQGLTWLLVGLAMSLQVKHLSRAWLKVFSILIFLVSGIFCASSLFYAIRSRELTLKVALDVLSFPGAMLLLLCTYKESNHEDTYREIDESLYAPLNGDSNKIDSIDNVTLFAKAGFFNRMSFWWLNSLMKRGKEKSLQEEDVPKLREDDRAESCYVLFLDQLNRHKQKGQSLQPSVLKTIVLCHWREILISGFFALLKVLAVCCGPLLLNSFILVAEGNESFKYEGFALVISLFVIKIIESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQIKLSNSARLTHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCISLVLLINAVGLATIASLVVVVVTVLCNTPLAKLQHKFQSKLMVSQDARLKASSEALVNMKVLKLYAWETSFKNSIEALRDVEVKWLSAVQLRKAYNSFLFWSSPVLVSAATFGACYFLNVPLHANNVFTFVASLRLVQDPIRTIPDVIGVVIQAKVAFARITKFLEAPELQNSNVKKSCFNDNVRGSILIKYADFSWEDNFSNPTLNDINLEVRAGQKVAICGEVGSGKSTLLAAILREVPNTRGTIDAYGKLAYVSQTAWIQTGTIQENVLFGSDMDPQRYQETLHRSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATHLFNEYIMEGLAGKTVLLVTHQVDFLPAFDTVLLMSGGKILEAAPYDHLLTSSQEFEDLVNAHKETAGSDRPLDVTSSHRPSNTTGEIKKTSMENQFEASQGDQLIKKEEKEKGDQGFKPYLQYLNQNRGYIYFVVAALSHLIFVIGQILQNSWMAAYVDNPEVSTLRLIVVYLLMGVISTSILLIRSLATVALGIQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSILDLDIPFGFVFAVGATINCYANLTVLAVVTWQVLFVSIPMIYFAIRLQKYYFATAKELMRLNGTTKSFVANHLAESVAGAVTIRAFGEEDRFFMKNLDLIDVNASPYFHSFAANEWLIQRLETVSAVVLASAALCMVLLPPGTFSPGDILISTSDFITGFIGMALSYGLSLNMSLVFSIQNQCNISNYIISVERLNQYMHIPSEAPEVIEGNRPPVNWPVVGKVEIHDLQIRYRPDAPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPASGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEYKWTNCSFHVKVLGKCQLLEVVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTIRTEFSDCTVITVAHRIPTVMDCTKVLAISDGKVEEYDEPSKLMKREGSLFGQLVKEYWSHFQSADSH 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0076 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 846 IPR027417 -
Lal12g0076 1501 CDD ABC_6TM_ABCC_D1 309 596 IPR044746 GO:0140359
Lal12g0076 1501 Gene3D - 618 852 IPR027417 -
Lal12g0076 1501 MobiDBLite consensus disorder prediction 855 875 - -
Lal12g0076 1501 CDD ABC_6TM_ABCC_D2 914 1219 IPR044726 GO:0140359
Lal12g0076 1501 Gene3D ABC transporter type 1, transmembrane domain 296 609 IPR036640 GO:0005524|GO:0016021
Lal12g0076 1501 Gene3D - 1228 1490 IPR027417 -
Lal12g0076 1501 CDD ABCC_MRP_domain1 623 823 - -
Lal12g0076 1501 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Lal12g0076 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1244 1489 IPR003439 GO:0005524
Lal12g0076 1501 SUPERFAMILY ABC transporter transmembrane region 904 1224 IPR036640 GO:0005524|GO:0016021
Lal12g0076 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0076 1501 SUPERFAMILY ABC transporter transmembrane region 296 601 IPR036640 GO:0005524|GO:0016021
Lal12g0076 1501 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 71 1501 - -
Lal12g0076 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 71 1501 - -
Lal12g0076 1501 Pfam ABC transporter transmembrane region 308 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0076 1501 Pfam ABC transporter transmembrane region 916 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0076 1501 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lal12g0076 1501 Pfam ABC transporter 1261 1420 IPR003439 GO:0005524
Lal12g0076 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1234 1482 IPR027417 -
Lal12g0076 1501 SMART AAA_5 1270 1473 IPR003593 -
Lal12g0076 1501 SMART AAA_5 650 823 IPR003593 -
Lal12g0076 1501 CDD ABCC_MRP_domain2 1242 1473 - -
Lal12g0076 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 588 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal12g0076 1501 MobiDBLite consensus disorder prediction 849 875 - -
Lal12g0076 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 846 IPR003439 GO:0005524
Lal12g0076 1501 Gene3D ABC transporter type 1, transmembrane domain 880 1225 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0076 Lal-Chr12 489349 496186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0076 617 877 Calmodulin-binding Proteins AT2G36910 31.071 1.04e-26 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0076 K05666 - gmx:100811468 2417.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0076 12 489349 496186 Lal12g0076 12 489349 496186 ECH
Lal12g0076 12 489349 496186 Lal24g0066 24 401914 414902 LSH
Lal2g0970 2 6519959 6529892 Lal12g0076 12 489349 496186 PCT
Lal12g0076 12 489349 496186 Lal2g0970 2 6519959 6529892 PCT