Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0062 ATGGATATCCAAAACCTTATACCTTTTATCCTTCTCTTTTTCATTCCATGCTCTTTTTGCTTCACTCCAATAGATAACTACCTTCTCAACTCTGGATCACACACCAATGCTTCACTCTTCAACCGAGTCTTCGTGGCTGATTCCACTTTTCTCTCTGCTGAAAAATCCATTTCACTCACTAACCAAAACCCACCTCCAAATTCTCCTACTTTGTACCATACAGCCAGAGTTTTCACCAACACTGCTACTTACAGGTTCAGCATGAAGAAAAATGGTATCCAATTGGTGCGTTTTCATTTCTTTCACTTTAAAACTCAAGGTTTTGATATGAAGTCTTCAAATTTTGATGTTTTGGTTAATAACATTTTGGTTCTCACTGGTCTCCAGTCAACTAGTGATGATGTGTTGATTAAAGAGTTTATCTTGAAGATAGAGTCAAACTTGCTTGAAATTTTGTTTAGACCTGTTGGTAACTCAGGTTTTGGATATGTAAATGCTGTGGAGGTGTTTAATGCTCCTCCAGATTTTGTATTAGATTATGGCACCAGGTTGGTTGGTCCTAATGGAGTGGAGGTCTACAACAAGCTCTCATCTCAGGTTTTGGAAACTATTCATAGGATTAATGTTGGAGGATTGAAAATAACACCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTTTTTGGTTTTTAAGGATGCTGCTAAGGCTGCAGTAAGTACTCAAACACCAAATTACCAGAAAGGAGGTTCCACACCGGAGATTGCGCCGGATAATGTTTACATGACTGCTCAACAGATGAATAGGGACAACTCTATTTTAGCTTCAAGGTTCAATATAACCTGGAATTTTACCGTGGCTCCTCCTGGTGGTGGTGCTCCACACTTGGTTCGGTTGCATTTCTGTGACATTGTTAGTCCTGTTCTTAACTTGCTCTACTTTGATGTGTATATTAATGGGTATGTTGCATATAAGGATCTTGATTTGTCATCCCTTACTGTCCATACACTTGCCTCGCCAGTCTATGTGGATTTTGTTGCAGATTCAGATGATTCAGGTGTTATTCAAATAAATGTTGGTCCTTCTGATCTTAGCAGTGCTATGAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTGAATGTTATTGATTCTAGTATTGTGCACAGGAAGAAAAAATTGGGGGTGTTGGTGAGTTCAATTGTTGGAGGTTCTGTTGGCTTATTTATAGTTATCATTGTTTTTCTACTTGCTATGAAATGCAGGAAGAAGAAACCAAAATTGAGGACAGTGGAAAGTGCTGGATGGACGCCTTTACGTATGTTTGGAGGGAGTTCCCTCGGTAGAATGTTGTCTGAAACTGGTTCTCATGGATATTCAGGCTTGAAGATCCCTTTTGCTGATATACAATCCGCAACCAACAAGTTTGATAGAAGCCTAATTATAGGGTCCGGTGGGTTTGGTATGGTTTACAAAGGGGTACTTAAGGACAATGTGAAGGTTGCGGTGAAGAGAGGTATGCCAGGGTCCAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAATTCTATCCAAAATTCGCCATCGCCACCTTGTTTCACTAGTCGGATTTTGCGAAGAGAATTCAGAAATGATACTTGTGTATGAGTATGTGGAAAAAGGTCCACTTAAAAGGCACTTATATGGCTCAGCAGCGCAACCACCTCTCTCTTGGAAGCAGCGTCTCGAAATATGCATCGGTGCAGCTAGAGGTCTTCACTATCTTCACACAGGTTTTGCACAGGGTATCATCCACCGTGACATTAAATCAACCAATATATTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGATCAGGGCCATGTATGAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGCTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAGCAGCTTACGGATAAATCAGATGTTTATTCATTTGGTGTTGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAACTAACAAGGGAGCAAGTGAATTTGGCAGAATGGGCACTTGAATGGATGAACAAGGGTATGCTAGAGCATATTGTTGATCCTCATCTTGTTGGACAAATCAAAGATAGATCACTCAAGAAGTTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGATAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAATATGCGCTTCAGCTTCAAGAAAGTGGACAACAAAGGGAACCACATACTGATAGCAGTACTAATGAAGCAGTGAATGTGACAAACAGGGTTGTCCTTGGAAGTTCTTCTAGCAACAGAAGAACTGAGAGAGATTATGATAATGGTTGTTCAGACATATGTGGTAGCCAAGTGTTTTCCCAGCTAATGACCAATGAAGGAAGATAG 2466 0.4051 MDIQNLIPFILLFFIPCSFCFTPIDNYLLNSGSHTNASLFNRVFVADSTFLSAEKSISLTNQNPPPNSPTLYHTARVFTNTATYRFSMKKNGIQLVRFHFFHFKTQGFDMKSSNFDVLVNNILVLTGLQSTSDDVLIKEFILKIESNLLEILFRPVGNSGFGYVNAVEVFNAPPDFVLDYGTRLVGPNGVEVYNKLSSQVLETIHRINVGGLKITPFNDTLWRTWIPDEDFLVFKDAAKAAVSTQTPNYQKGGSTPEIAPDNVYMTAQQMNRDNSILASRFNITWNFTVAPPGGGAPHLVRLHFCDIVSPVLNLLYFDVYINGYVAYKDLDLSSLTVHTLASPVYVDFVADSDDSGVIQINVGPSDLSSAMRMNAILNGAEIMKMVNVIDSSIVHRKKKLGVLVSSIVGGSVGLFIVIIVFLLAMKCRKKKPKLRTVESAGWTPLRMFGGSSLGRMLSETGSHGYSGLKIPFADIQSATNKFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSAAQPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCMNETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWMNKGMLEHIVDPHLVGQIKDRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESGQQREPHTDSSTNEAVNVTNRVVLGSSSSNRRTERDYDNGCSDICGSQVFSQLMTNEGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0062 821 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 765 - -
Lal12g0062 821 Gene3D Phosphorylase Kinase; domain 1 455 557 - -
Lal12g0062 821 Gene3D - 200 387 - -
Lal12g0062 821 Gene3D - 26 173 - -
Lal12g0062 821 Pfam Malectin-like domain 38 385 IPR024788 -
Lal12g0062 821 MobiDBLite consensus disorder prediction 761 799 - -
Lal12g0062 821 SMART serkin_6 482 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0062 821 PANTHER OS07G0166700 PROTEIN 15 765 IPR045272 GO:0004714|GO:0006468
Lal12g0062 821 SUPERFAMILY Protein kinase-like (PK-like) 468 751 IPR011009 -
Lal12g0062 821 Gene3D Transferase(Phosphotransferase) domain 1 558 782 - -
Lal12g0062 821 Pfam Protein tyrosine and serine/threonine kinase 487 748 IPR001245 GO:0004672|GO:0006468
Lal12g0062 821 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
Lal12g0062 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Lal12g0062 821 ProSiteProfiles Protein kinase domain profile. 482 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0062 821 CDD STKc_IRAK 488 754 - -
Lal12g0062 821 MobiDBLite consensus disorder prediction 761 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0062 Lal-Chr12 408944 411409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0062 1 821 Receptor kinase-like Gene Family AT3G46290 48.884 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal12g0062 Malectin_like 1.9e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0062 - - gmx:100801169 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0062 12 408944 411409 Lal12g0062 12 408944 411409 ECH
Lal12g0062 12 408944 411409 Lal13g0054 13 349081 351552 LSH
Lal2g0936 2 6297032 6299479 Lal12g0062 12 408944 411409 PCT
Lal12g0062 12 408944 411409 Lal2g0936 2 6297032 6299479 PCT