Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0059 ATGCCTTCATGGTGGGGGAAATCGTCATCAAGTTCAAAAGAAACCAAGAAGAAAGCGAATAAGGAAAGTTTTATTGATACACTGCACCGGAAATTTAAAATTCCATCTGAAGTTAAACTAAGTAGTAAAACTGGAGGATCTCGTACTCGTAGACATTCCAATGAAACAATTTCAGAGAAGGCAGATAATTCCCCCGCTGGCTCAAGATCTCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTTTGCACCCTTCAATTTTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAGAAGGGCTCAAAGCCATCATTGTTTCTTCCGCTTCCAAAACCTGCATGCTTGCGTGGTAGGCCGAATCCTTCAGATTTTGATGGAGATCTGGTCACTGCTTCAATCTCTAGTGATTGCTCTGTTGATAGTGATGAGCCAGCTGAGTCACGTAACCGTAGTCCTCGGGCAACTGACTCTGAGACTGGGACTAAAATTGCTGCTGGCAGTCCTTCCAGCGTGATGCACAAGGATCAATCGGCCGCTGTTTCCCAGCTAAATTCAAGAGAATCAAAAAAGCCAGCAAACATTTTGAGCAATCATATGGCTTCTAATTCACCAAAACGGAGGCCTTTACGCAACCATGTTCCAAATCTGCAAGTTCCTCCTCATGGTGCTTTCTACAGTGCTCCTGACAGTTCCTTCTCAAGTCCATCTAGAAGTCCATTGAGAGCGTTTGGCACCGATCAGGTGTTGAACTCTGCTTTTTATTCTGGAAAGCCATATTCTGAGGTCAATTTCATTGGATCTGGGCACTGCTCTAGTCCAGGCTCTGGTCATAATTCTGGGCATAATTCAATGGGAGGGGATATGTCAGGGCAGTTATTTTTGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCAGGTCCAAGCTCGAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCTGGGGGAACATCAAATGAATCACATATAGGATGGGCTGATGAAGGGAAACAACAGAGTCATCGCTTGCCTCTTCCTCCTTTGGTTGTTACCAAGTCTTCGCCTTTCTCTCACTCAAATTCTGCGGCAACATCTCCATCTGTGCCAAGGAGTCCAGCTAGAGCAGATAATCCAATGAGTCCTGGCTCACGCTGGAAAAAAGGAAAGTTGCTTGGTAGAGGCACATTTGGACATGTCTACCTTGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTAAGGAATGTGCTAAGCAATTAAATCAGGAAATTAATTTATTAAGCCGTTTAAGGCATCCGAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACACGCTTTACATATACCTGGAGTATGTATCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGGAATTTAGTGAACCAGTTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACACGCTAAAAATACTGTCCACAGAGACATCAAGGGAGCAAATATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAGACGTGTCCATTATCATTCAAGGGAAGCCCTTATTGGATGGCTCCCGAGGTTATAAGGAACAATGGATTGAACATTGCTGTGGATGTATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGATTGCTGCTATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATAGTCTCTCAATTGAAGGAAAAGATTTTGTTAGGAAATGTTTACAGCGTGATCCACGTGATCGCCCTTCGGCCAGTGCTTTATTGAGTCACCCTTTTGTTAAGTGTACTTCACCTTCAGAAAGATCTAGTCTGGGTCCTGAGGCTTCAGACCCTGTTTCTTGGATTACACATGGAGCAAAGGCTCTGGGCATTGGACAAGGGAGAAACCTTTCTCTTTTAGACTCAGATAGACTCGCTGTTCATTCTTCTAGGGTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCCGTCTCTCCTATTGGAAGCCCACTTTTGAGGTCAAGATCGCCACAGCACATGAATGGGGGAATGTCTCCTTCTCCAATTTCAAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCACTGGTGGCAATGGCGCCATTCCATTTGGTAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAACATGCCAAAGTTGTCCTCGAATGGTGTCTACATGAATATGAATGGCCCTATTCATAATGACTCAAATATTGACATGTTTCGAGGAATGCAAATGGGGTCTCACATGACATCAGAAATGTTTCCCAATGAAATTGATGTTCTGGGTAAGCAGTTCGCAAGGCCTCATCCTGTCGAGCCGTATGATTTTCAGTCAGTCTTGGCTGATCATGTTGGCCGGCAGCTGCTGGGGGATCATGTTAAGATTAATCCATCCCTTGATCTAAGTCCTAACTCATCGTTGCTTAGTCGGGCAAACGGTTTATGA 2718 0.4397 MPSWWGKSSSSSKETKKKANKESFIDTLHRKFKIPSEVKLSSKTGGSRTRRHSNETISEKADNSPAGSRSPSPSKVARCQSFAERPHAQPLPLPGLHPSILGRVDSEISISSKSRLEKGSKPSLFLPLPKPACLRGRPNPSDFDGDLVTASISSDCSVDSDEPAESRNRSPRATDSETGTKIAAGSPSSVMHKDQSAAVSQLNSRESKKPANILSNHMASNSPKRRPLRNHVPNLQVPPHGAFYSAPDSSFSSPSRSPLRAFGTDQVLNSAFYSGKPYSEVNFIGSGHCSSPGSGHNSGHNSMGGDMSGQLFLQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTSNESHIGWADEGKQQSHRLPLPPLVVTKSSPFSHSNSAATSPSVPRSPARADNPMSPGSRWKKGKLLGRGTFGHVYLGFNNDSGEMCAMKEVTLFSDDAKSKECAKQLNQEINLLSRLRHPNIVQYYGSETVDDTLYIYLEYVSGGSIYKLLQEYGEFSEPVIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQTCPLSFKGSPYWMAPEVIRNNGLNIAVDVWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPDSLSIEGKDFVRKCLQRDPRDRPSASALLSHPFVKCTSPSERSSLGPEASDPVSWITHGAKALGIGQGRNLSLLDSDRLAVHSSRVLKTNPHASEIHIPRNISCPVSPIGSPLLRSRSPQHMNGGMSPSPISSPRTASGASTPLTGGNGAIPFGNHLKQSVYFQEGLGNMPKLSSNGVYMNMNGPIHNDSNIDMFRGMQMGSHMTSEMFPNEIDVLGKQFARPHPVEPYDFQSVLADHVGRQLLGDHVKINPSLDLSPNSSLLSRANGL 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0059 905 MobiDBLite consensus disorder prediction 59 77 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 160 174 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 112 249 - -
Lal12g0059 905 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 813 - -
Lal12g0059 905 SUPERFAMILY Protein kinase-like (PK-like) 403 671 IPR011009 -
Lal12g0059 905 MobiDBLite consensus disorder prediction 1 100 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 751 786 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 751 781 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 11 37 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 175 223 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 382 401 - -
Lal12g0059 905 ProSiteProfiles Protein kinase domain profile. 415 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0059 905 CDD STKc_MEKK1_plant 414 670 - -
Lal12g0059 905 Gene3D Transferase(Phosphotransferase) domain 1 413 688 - -
Lal12g0059 905 Pfam Protein kinase domain 416 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0059 905 MobiDBLite consensus disorder prediction 291 417 - -
Lal12g0059 905 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Lal12g0059 905 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 813 - -
Lal12g0059 905 MobiDBLite consensus disorder prediction 291 317 - -
Lal12g0059 905 SMART serkin_6 415 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0059 Lal-Chr12 389881 395976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0059 4 894 MAP Kinase Kinase Kinase AT1G63700 57.047 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal12g0059 Pkinase 6.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0059 K20717 - gmx:100792783 1377.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0059 12 389881 395976 Lal12g0059 12 389881 395976 ECH