Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0054 ATGGTTAGGGAAATGGCTCCAAAGCAGCCAAGTACGGGTCTTTTTGTTGGATTAAACAAGGGTCACGTTGTTACCAAAAGGGAATTGCCTCCACGCCCTTCAGATCGCAAAGGGAAAACAAGCAAGAGGGTGCACTTTGTCAAGAACCTCATTCGTGAGGTTGCTGGTTTTGCACCTTATGAGAAGCGTATCACTGAGTTGCTCAAGGTTGGAAAGGATAAGAGGGCACTGAAAGTTGCGAAGAGAAAGCTTGGAACCCACAAGCGTGCTAAGCGAAAGCGTGAGGAGATGTCTAGTGTTCTCCGCAAAATAAGGTCTGGTGGTGGAGCCAGTGACAAGAAGAAATAA 348 0.4713 MVREMAPKQPSTGLFVGLNKGHVVTKRELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKIRSGGGASDKKK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0054 115 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 3 114 - -
Lal12g0054 115 Pfam Ribosomal protein L36e 12 105 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal12g0054 115 ProSitePatterns Ribosomal protein L36e signature. 59 69 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal12g0054 115 Gene3D 60S ribosomal protein L36 3 110 IPR038097 -
Lal12g0054 115 MobiDBLite consensus disorder prediction 91 115 - -
Lal12g0054 115 MobiDBLite consensus disorder prediction 83 115 - -
Lal12g0054 115 PANTHER 60S RIBOSOMAL PROTEIN L36 3 114 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0054 Lal-Chr12 368495 370361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0054 11 115 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 87.736 1.97e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0054 K02920 - gmx:100795507 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0054 12 368495 370361 Lal13g0045 13 304976 307216 ECH
Lal12g0054 12 368495 370361 Lal12g0054 12 368495 370361 ECH
Lal12g0054 12 368495 370361 Lal13g0045 13 304976 307216 LSH