Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0053 ATGAAGGTTGATGTTATTGTTGTTATATTATTGTATCTGGTGACAGTGCCACCATGGCTTGTTTGTTCCCAAGAACATAGACTTCTTGTTAAGATGACACTTGTCCAAAACGCTAATGAAACCACTGCTCTTTGTTTGGATGGGAGTTTACCAGCCTATCATTTAGACAGAGGAAGTGGAACTGGAATTAATAACTGGCTTCTACAATTCGAGGGAGGTGGATGGTGCAATAACTTGGCTACATGCTTAGAGAGAGCCAAGACTCGTAGAGGCTCAACAAATTTCATGACCAAGTTGGAGTCCTTTTCTGGCATTTTGAGTAACGATCCTTCCCTTAATCCAGACTTTTATAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTCACAGGAGACACTGTGTTCACTAATGGGACAAATACTCTTTATTTCAAAGGACAAAAGATTTGGGAAGCTATCATTAAAGACCTTATACCAAAAGGTTTGGGAAAGGCAAGCAAGGCCTTGCTTTCAGGTTGTTCTGCTGGAGGTTTAGCCACCTTCCACCAATGTGACAACTTAGCCACACATTTGCCGAATGCCCATGTTAAATGCTTGAGCGATGCAGGGTTTTTTCTGGACGCGAAAGATATAAGTTCAAAATATACTATGAGAAACTTCTTCAGAGGTGTTGTTGAATTGCAGTGCTACTTTCCACAAAATGCGTTGAAATACATATCGCCACCATATTTTATCTTGAATACTGCCTATGATGTATTCCAATTCCGAAATATATTGGTGCCACCTTCTTCTGATATACATAAAAAATGGACCCAGTGCAAGCAGGATCCAGCGGCATGCACACCAGACGAAATTAATATATTGCAAGGTTTTAGGAACAACATGCTTGATACTTTAAAACCATTCAGTTTAAATTCAGAAAGTGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCGCAAGATACATGGTTTGGACCTGATTCTCCAAGAATAAACAACAAGAGTATTGCAGAAGCTGTTGGTGATTGGTATTTTGAGAGAAAGAAAAGCAAGGAAATAGACTGTGAATATCCATGTGATAAAACTTGTCGTAATCTTATCCCACAATCTCCGGTATAG 1143 0.3946 MKVDVIVVILLYLVTVPPWLVCSQEHRLLVKMTLVQNANETTALCLDGSLPAYHLDRGSGTGINNWLLQFEGGGWCNNLATCLERAKTRRGSTNFMTKLESFSGILSNDPSLNPDFYNWNRVKLRYCDGASFTGDTVFTNGTNTLYFKGQKIWEAIIKDLIPKGLGKASKALLSGCSAGGLATFHQCDNLATHLPNAHVKCLSDAGFFLDAKDISSKYTMRNFFRGVVELQCYFPQNALKYISPPYFILNTAYDVFQFRNILVPPSSDIHKKWTQCKQDPAACTPDEINILQGFRNNMLDTLKPFSLNSESGGMFINSCFAHCQSESQDTWFGPDSPRINNKSIAEAVGDWYFERKKSKEIDCEYPCDKTCRNLIPQSPV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0053 380 PANTHER PECTIN ACETYLESTERASE 9 20 376 - -
Lal12g0053 380 PANTHER NOTUM-RELATED 20 376 IPR004963 GO:0016787
Lal12g0053 380 Pfam Pectinacetylesterase 23 357 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0053 Lal-Chr12 355932 362509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0053 1 378 Carbohydrate Esterase AT5G23870 58.500 3.35e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0053 K19882 - gmx:100794453 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0053 12 355932 362509 Lal12g0053 12 355932 362509 ECH