Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0033 ATGGCTGTTGCCAAAGGCAACACTGGAACTGATCCTTCTACTTCATACAATTGTTACAAAGTAGCAACCTTGACCAAAACCATATTAGACTCAAAGCAGATCTCTAATTTGAAAGACCAATACATTCTTGGGGAGCAATTGGGTTGGGGACAGTTTGGTGTCATAAGAGCATGTTCCAATAAATTGACCGGTGAGGTTTTGGCATGCAAATCCATTGCTAAAGATAGGTTGGTTACTTCAGATGATATGCAGAGTGTCAAACTAGAGATTGAGATTATGGCGAGGTTATCCGGACACCCGGATGTCGTAGATCTCAAGGCAGTTTATGAAGAGGAAAATTTTGTGCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAACTGTTTCACCGATTAGAGAAGCATGGGCGGTTTTCAGAACATGAAGGGAGGGTTCTCTTTAGACACCTCATGCAGGTGGTTTTATATTGTCATGAGAACGGGGTTGTTCATAGAGATTTAAAGCCTGAGAACATTCTCTTAACAACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTAGCCACCTACATCAAGCCTGGGCAGAGTTTGCATGGTTTAGTTGGGAGTCCATTCTATATAGCTCCAGAAGTACTTGCAGGTGCATATAACCAGGCTGCAGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTACTTAGTGGGATGCCTCCTTTTTCGGGGAAGACCGAGTCGCGGATATTTGAAACTGTTAAGGCTGCTGATTTGAAGTTCCCATCTGAACCTTGGGATCACATTTCTGACTCAGCCAAGGATTTGATTAGGGGAATGCTCTGCGCAGAACCTTCTCAAAGGCTCACTGCTCAGGAGGTTTTGGATCATTGCTGGATGGAAAACAGTGAAATAAATCATGAACAACTTAATGAACATAAACTTGGAAGTTGTGTAGGATGGGACGTTGATGGCAACTCAGTCTCTTCTTCCTTTATGTTGAGGAATCAAGACATCAGCTTTGGTGCTGGATCACCTGCATGCGAAGCTCAATCACCTACATTCACATGCAGGGCATCGTTTTCTTCTTATCTTGTGGAACCAGTGACTCCTTGTTCTGTTGCGGATGTGTTTTCATTTCAGAGCTCAGTTGATTGCATTGGCTTGGAAATTTCCTCTCTTATTCCATCATTGCCTAGCTTTGCATTTCTCAGCCAGGATTCTGATACTCAGCCAACGAGACGTTCATTAGAGTTCTCAACTAACAAATCAGATGTAAAGGAAATTGCTGGAGATTCTTCCCTCTGCTTTGGAGACGATGTTAAAGAATTGGATCGAAAGTGTGGAATGAATGGGCATAGGGCATTGGGATTCCATAGCAAGAGAAACCAGACGATTGGACTTGGGGAGTGTGAGCAACTTGATCTTGTAGTGACGGAATCAGTGATTCGCTGGTCATCATGTACACAACTTCCTACAACACTTAGATCATCTCTGGTGTATTAA 1503 0.4325 MAVAKGNTGTDPSTSYNCYKVATLTKTILDSKQISNLKDQYILGEQLGWGQFGVIRACSNKLTGEVLACKSIAKDRLVTSDDMQSVKLEIEIMARLSGHPDVVDLKAVYEEENFVHLVMELCAGGELFHRLEKHGRFSEHEGRVLFRHLMQVVLYCHENGVVHRDLKPENILLTTRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFSGKTESRIFETVKAADLKFPSEPWDHISDSAKDLIRGMLCAEPSQRLTAQEVLDHCWMENSEINHEQLNEHKLGSCVGWDVDGNSVSSSFMLRNQDISFGAGSPACEAQSPTFTCRASFSSYLVEPVTPCSVADVFSFQSSVDCIGLEISSLIPSLPSFAFLSQDSDTQPTRRSLEFSTNKSDVKEIAGDSSLCFGDDVKELDRKCGMNGHRALGFHSKRNQTIGLGECEQLDLVVTESVIRWSSCTQLPTTLRSSLVY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0033 500 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 8 493 - -
Lal12g0033 500 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lal12g0033 500 CDD STKc_CAMK 40 298 - -
Lal12g0033 500 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0033 500 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Lal12g0033 500 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 493 - -
Lal12g0033 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lal12g0033 500 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0033 500 Gene3D Transferase(Phosphotransferase) domain 1 128 319 - -
Lal12g0033 500 SUPERFAMILY Protein kinase-like (PK-like) 39 300 IPR011009 -
Lal12g0033 500 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0033 Lal-Chr12 247971 252040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0033 32 300 EF-hand Containing Proteins AT5G19360 49.442 3.77e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal12g0033 Pkinase 5.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0033 - - gmx:100776088 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0033 12 247971 252040 Lal12g0033 12 247971 252040 ECH