Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0029 ATGGACTCGAATCCTAACCGGGATGGTGATTTCAGCGAAGAAGACGACTCACCCAGTTCAGAGACGATTCCAATGCTTGATTTGCCGCAACCTGCTCCGGCGACGGCGGATTCACTGAAGGAAGAGCACACTGACACGGAGCGAAGTATGGGAGAGCCTATTCCGATGGGTCTTATTCCGGTGCCATTGACAATGTCAAGGCCGGTGCCGGTGAGGAAACCGTCAAAGGACCGGCACACAAAAGTGGAGGGTCGTGGCCGGAGAATTCGAATGCCGGCGACGTGTGCCGCCAGGATATTCCAACTGACCCGTGAACTCGGGCACAAGTCCGACGGCGAAACAATCCGGTGGTTATTAGAACGCGCTGAGCCGGCGATAATAGAAGCCACCGGTACCGGAACGATCCCGGCCATCGCGGTATCCGTTGGTGGGACATTAAAGATTCCAACTTCATCAGCAGCAAGACCAGATGGTGAAGAGAGTGTAAGAAAGAGAAGAAGAAGAGCATCAAACAGTGAATTCATTGAAGTGAATGAGGATGGTTCAGTTTCTTCAGGGCTTGCACCAATAGCACAAAATTCTTATATTGGTGGCCCACAAAATGGACTAGTTCCATTGTGGTCTAATAATAATAATAATAATAACAATAATGGTGCATTCTTTATGCCTCAGTATTGGGCTATACCAGCAAGTGCTGCACCATTTTTTAATTTTCAACAAGGACTAAGACCTATCTCAGGTTTTGTTTCTGCTATGCAAATTCAACCACATCAATTAACTACTAATACTACTTCATCCACGATGGCTCCTACTTTGAGTTCTGCTACTAATGCTGCTGTTACCACTATTACTACAACTTCTGTTACCTCTTCCTCTTCCTCTTCTGGTGCTACAACTACTCAGATGCTCAGGGATTTCTCTCTTGATATTTACGACAAGAAAGAGATCACATTTATGGCTCTCTCTGATGCAAATTCAGAACCATCTTCTACTTCGAAGCCTTGA 1005 0.4627 MDSNPNRDGDFSEEDDSPSSETIPMLDLPQPAPATADSLKEEHTDTERSMGEPIPMGLIPVPLTMSRPVPVRKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPDGEESVRKRRRRASNSEFIEVNEDGSVSSGLAPIAQNSYIGGPQNGLVPLWSNNNNNNNNNGAFFMPQYWAIPASAAPFFNFQQGLRPISGFVSAMQIQPHQLTTNTTSSTMAPTLSSATNAAVTTITTTSVTSSSSSSGATTTQMLRDFSLDIYDKKEITFMALSDANSEPSSTSKP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0029 334 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 17 332 - -
Lal12g0029 334 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Lal12g0029 334 MobiDBLite consensus disorder prediction 71 85 - -
Lal12g0029 334 Pfam TCP family transcription factor 75 158 IPR017887 -
Lal12g0029 334 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 332 IPR005333 GO:0003700
Lal12g0029 334 MobiDBLite consensus disorder prediction 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0029 Lal-Chr12 233182 234904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0029 66 319 TCP Transcription Factor Family AT5G51910 50.936 2.55e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal12g0029 TCP 9.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0029 - - gmx:100819475 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0029 12 233182 234904 Lal12g0029 12 233182 234904 ECH