Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0021 ATGGAAAATGATGGCTCGCTGCTCTTACTCTTACTCTATGCTTCTCAACACCAAAGGACAAAGCTTTTGCTGTCTGGTATACCAACGCTGCTTCTGTTACTGTTGTTGCTTCTCTCTCCATTTGCTTCACCACTCACCCAAGAAGGAGAAGCATTAATGGAGATGAAAAGTAGATTCACAAACGTAGGCGATGTTTTGCTTGAATGGGATGATATTCACAATGATGATTTCTGCTCTTGGCGTGGTGTTTACTGTGATAATGTCACTTTCACTGTTCAATCTCTGAATCTCTCAAACTTGAATCTAGGTGGAGACATATCTACTGCCATTGGTGATCTACCAAATTTGCGATCCTTAGACTTTTCAGGGAATAAACTAATAGGTCAAATCCCTGATGAAATTGGAAACTGTGCTCAGCTTATTCATTTGGATTTGTCTGAAAATCAGCTATATGGTGATATACCTTTCTCCATTTCCAAGCTAAAGCAACTTGAGTTTTTGAATTTAAAGAATAATCAGTTGACGGGTCCTATCCCCTCTATTTTAACACAAATTCCAAACCTTAAGATTCTTGATCTTGCTCAAAATAGGTTCATGGGGGAGATACCAAGATTACTCTATTGGAGTGAAGTGTTACAGTACTTAGGGCTGAGAGGGAACATGTTGACTGGAACATTGTCAACTGACATGTGTCAGTTAACTGGTTTAGCTTATTTTGACGTAAGAGGCAATAATTTGACTGGAACTATACCTGACAGTATTGGGAACTGCACAAGTTTTGAAATCTTGGACTTATCATACAATCAGATTACTGGGGAGATCCCCTATAATATTGGTTTTCTGCAAGTGGCAACTTTGTCACTTCAAGGAAATAGACTTACCGGAAAGATTCCTGAAGTGATTGGTTTAATGCAAGCCCTTGCTATTTTGGATTTGAGTGAAAATGAGTTGGTTGGACCCATCCCTCCAATACTGGGAAACCTGTCGTTTACTGGCAAGCTGTATCTTCACGGAAACAAGCTTAGTGGCTCCATACCTCCAGAACTTGGGAATATGTCTAAACTGAGCTACTTGCAATTGAATGGAAATCAACTAGTTGGTAGTATTCCTGACGAAATTGGAATGCTGGAAAATCTTTTTGAATTAAATCTTGCAAATAATCATCTTGAAGGATTGATTCCTCATAACATAAGCTCATGCACTGCCTTAAATCAGTTTAATGTTCATGGTAATCACTTGAGTGGTTCCATTCCTCGGAGCTTCCGTAGCCTTCAAAGTCTGACTTCTTTAAATCTTTCTGCAAACAACTTCAATGGCAATATTCCTGTTGAATTGGGCCATATTGTAAATCTTGATACACTAGATCTGTCCAGCAATAATTTTTCTGGACATGTCCCAGCATCTGTTGGCTTTCTGGAGCATCTCTTGACCCTGAATTTGAGCCATAACCACCTTGATGGCCCTTTGCCTTCTGAATTTGGTAATCTTAGAAGCATACAGATTATGGATATGTCATTCAACAATATGTCCAATAGTTTACCTCCTGAGTTTGGCCAGCTGCAAAACCTTATGTATCTGATTTTAAACAACAATTACTTGTGTGGGGAGATTCCAGATCAATTAACCAACTGTTTCAGTCTTATTTCTCTGAACTTTTCTTACAACAACCTTTCTGGAACTGTTCCTTCTATGAAGAATTTCACCCGGTTTTCAGCTGATAGCTTCATTGGGAATCCTTTATTATGTGGAAATTGGTTAGGGTCAATATGCCATCCTTTCATATTGACATCCAGAGTGACTTTCTCAAAAGTTGCAATTGCTTGTCTCTTATTTGGAATCGTCATAATATTGGCCATGGTTACTGTTGCTGCATATAGATACAGCCAATCAAAACTCTTGGTGAACGAACTGAGCAAAAGGCCTCCTAAACTTGTTATTCTTCGTATGGATATGGCTATCCACACCTTAGAGGATATTTTTAGAAATACTGAGAATCTTAGTGAGAAATATGCTGTAGGGTATGGTGCCTCTAGTACTGTATACAAGTGTGTTTTGAAGAATTCCAGACCAATTGCCGTTAAGCGATTGTTCAATCAGCATTCACACAACTTTAAGGAGTTTGAGACAGAACTTGAAACAGTTGGCAGCCTCAGGCATAGAAATCTTGTAACCTTGCATGGCTATGCCCTTACTCCATTTGGGAATCTCCTTCTCTATGATTATATGCCAAATGGCTCTTTGTGGGATCTTCTTCATGGTCCCTCAAAGGTAAAACTTGATTGGGAGACACGCTTGAAGATTGCTGTTGGTGCTGCTGACGGACTTGCTTATCTCCATCATGACTGCAACCCTAGGGTTGTTCACAGAGATGTAAAATCATCGAACATACTGCTTGATGAGAACTTTGAAGCCCACCTCTCTGATTTTGGCACTGCTAAATGCATGTCAGCCACTAAAACTCACACCTCAACTTATGTGGTTGGCACCATAGGCTATATTGACCCGGAGTATGCCCGAACTTCAAGATTGAATGAAAAGTCAGATGTCTATAGCTTTGGCATTGTTCTGCTAGAGCTACTTACTGGGAAGAAAGCAGTGGACAATGACTCTAACTTGCATCAATTGATATTGTCGAAGGCAGATAATAACACTGTAATGGATGCTGTGGATGCTGAAGTCTCAGTGACATGCATTAATGAGGGTAATGTTAAGAAGGCATTTCAGCTTGCTCTTCTTTGTACAAAAAGGAACCCTTCTGAGAGGCCTAACATGTATGAGATTGGAAGGGTTTTGGTATCACTACTGCCTGCACCTCCTACTACTAAGATCCATGCACCACCTTCAAAGGCCTTTGATTATAAGCATTTTGTGATGGAGAAGGGAGGAGAAAGACAATCCCAGCTTGATAGCAACATTTCATCTAATTCTCCATGGTTTTTTCCGTTTGCCGATGTTATATCCAAGTACTCGTCCCTTTAA 2979 0.3988 MENDGSLLLLLLYASQHQRTKLLLSGIPTLLLLLLLLLSPFASPLTQEGEALMEMKSRFTNVGDVLLEWDDIHNDDFCSWRGVYCDNVTFTVQSLNLSNLNLGGDISTAIGDLPNLRSLDFSGNKLIGQIPDEIGNCAQLIHLDLSENQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSILTQIPNLKILDLAQNRFMGEIPRLLYWSEVLQYLGLRGNMLTGTLSTDMCQLTGLAYFDVRGNNLTGTIPDSIGNCTSFEILDLSYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNKLSGSIPPELGNMSKLSYLQLNGNQLVGSIPDEIGMLENLFELNLANNHLEGLIPHNISSCTALNQFNVHGNHLSGSIPRSFRSLQSLTSLNLSANNFNGNIPVELGHIVNLDTLDLSSNNFSGHVPASVGFLEHLLTLNLSHNHLDGPLPSEFGNLRSIQIMDMSFNNMSNSLPPEFGQLQNLMYLILNNNYLCGEIPDQLTNCFSLISLNFSYNNLSGTVPSMKNFTRFSADSFIGNPLLCGNWLGSICHPFILTSRVTFSKVAIACLLFGIVIILAMVTVAAYRYSQSKLLVNELSKRPPKLVILRMDMAIHTLEDIFRNTENLSEKYAVGYGASSTVYKCVLKNSRPIAVKRLFNQHSHNFKEFETELETVGSLRHRNLVTLHGYALTPFGNLLLYDYMPNGSLWDLLHGPSKVKLDWETRLKIAVGAADGLAYLHHDCNPRVVHRDVKSSNILLDENFEAHLSDFGTAKCMSATKTHTSTYVVGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADNNTVMDAVDAEVSVTCINEGNVKKAFQLALLCTKRNPSERPNMYEIGRVLVSLLPAPPTTKIHAPPSKAFDYKHFVMEKGGERQSQLDSNISSNSPWFFPFADVISKYSSL 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0021 992 SUPERFAMILY L domain-like 47 329 - -
Lal12g0021 992 Gene3D Phosphorylase Kinase; domain 1 628 741 - -
Lal12g0021 992 Gene3D Ribonuclease Inhibitor 301 593 IPR032675 -
Lal12g0021 992 SUPERFAMILY Protein kinase-like (PK-like) 646 931 IPR011009 -
Lal12g0021 992 Pfam Leucine Rich repeat 256 273 IPR001611 GO:0005515
Lal12g0021 992 SMART serkin_6 666 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0021 992 Pfam Leucine rich repeat 450 508 IPR001611 GO:0005515
Lal12g0021 992 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Lal12g0021 992 Pfam Protein kinase domain 669 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0021 992 ProSiteProfiles Protein kinase domain profile. 666 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0021 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Lal12g0021 992 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Lal12g0021 992 Gene3D Transferase(Phosphotransferase) domain 1 742 940 - -
Lal12g0021 992 Gene3D Ribonuclease Inhibitor 208 299 IPR032675 -
Lal12g0021 992 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515
Lal12g0021 992 Gene3D Ribonuclease Inhibitor 45 207 IPR032675 -
Lal12g0021 992 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lal12g0021 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 36 971 - -
Lal12g0021 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 36 971 - -
Lal12g0021 992 SUPERFAMILY L domain-like 327 583 - -
Lal12g0021 992 SMART LRR_typ_2 233 257 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 376 400 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 472 495 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 424 448 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 520 544 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 161 184 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 496 519 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 113 137 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 185 209 IPR003591 -
Lal12g0021 992 SMART LRR_typ_2 352 375 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0021 Lal-Chr12 184887 192204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0021 115 990 Receptor kinase-like Gene Family AT5G07180 72.841 0.0 1278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lal12g0021 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0021 K20718 - gmx:100811653 1526.15