Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0019 ATGGAGGAAGAAAGTAACTGCTTCGATTGTCTGAAACTCAGAATAAACTCTGATTTCGGTGATGAAATCGTCTTCAATTATGGATTCTCCACTTCTCCTTTGCCTTTCGGATCCTCTGCAATCGTCCACATTTCTGGTGGTGAAGCTTCATCTGCTCAATTTATATTGCAGTACATCTCCACTCTTCACAAGAACTGTTTTACCAATTATGTAAATGAATATATTTTGGATAGTAGTGAAGGCCCTAGAAATGATGATAATCCTCATAATGGAGGAACTCAATATACTAATGTGGTTAATGGTGGAATTGATTCAGAAGATTCTGAAACCACAAAAGCTTCTTCCAGGAACTCAACTTGTAATCATTCCGGAAGATTTTCTTGCTCAAGGACAATCACTTCACTGGCCGCGATTGCTCGTGTGGGAGTTTCTTCCTGTTCTACTTTGCAAGACGTTGCTTCTGATTTCTTGTCTGGGTTAATTGAAGATCATGTGTTGGATTCACTTAATCTCTTGATTGAAGGGAAACCTTCAGGACGGGACAGTATAAATTTCCTCAGTTTAATTGGGTTGCCTTCATTTGAGGAAGATACTTTTCCCGGCTCCTTGAGGCATCCAAACATCGTTCCTGTTCTTGCGATACTTAGAACATCTGATCATGTTAACATGGTGCTTCCGAAGACTCCATATAACTTGGAACACATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGCATAGAAGATTTCTTATATATCAGCTGCTCTCAGCCTTAGTATACTTACATGGTTTAGGGGTTTCTCATGGAAATATATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTTGCTGCGATTATGGAGTGAAACTGTAATGGATTCTAATTTAACTTTGCAAAAGAGTGAAAGTGTTAATTCTGTCCCTGCCAAAATTGGTTGTTGTAATAGTGTGTGTCGCTCTAATGGCCTTTACGCTGATCTAAAGCTTTCTCCATCAGTAGATTGGCATTCTAGCTTTCATCAGTGGTGGAGAGGAGAATTAAATAATTTTGAGTATTTACTCATCTTGAACAGATTAGCAGGAAGAAGGTGGGGGGATCATACATTTCATCCAGTAATGCCTTGGGTAATAGATTTTAGCTCAAAACCTTATGATAATTGTGATGCAGGATGGCGAGACTTAACCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTGGACTTCACATATTCCACTTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAGTTGGCTGTCTGTAGTTATAAAGCAAGAAGGTTGCCTTTGAGTGTTCTCCTAATGGCTGTCCGTTCAGTGTATGAACCTAATGAGTATCCTTCCACAATGCAGAGGCTTTATCAATGGACCCCCGATGAATGCATTCCTGAGTTTTACAGTGATGCCCAAATTTTTAGGTCAATACATGATGGTATGGCTGATTTGGCTGTGCCTTCTTGGGCAGAGAGTCCCGAGGATTTCATTAAATTGCACCGTGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTACATCATTGGATAGATATAATCTTTGGGTACAAAATGTCCGGCCAGGCAGCTGTTACTGCTAAAAATGTGATGCTTCCTCCATCAGAACCTATGATGCCAAGATCAACAGGACGTCGTCAACTGTTTACACGGCCACACCCAATTCGTCATGCCACTGCCAGAATAAGACGTCATGGTACCAATAAATATGCCAAGGTTTGGAGCCAAGAAAATGAGATGCAGCAAGAGACAACTCTCCTATCTGAAACTGCTTATCTACAAGAACTAGAACAAGCATCTGCTTTTTCTGAACATGCTAGGCATTTGAATGCTTGTTACCATTATCCATTAAATCGAATAGAGAGGAACATATCATCCTTGGGTGATCCAACAACAGAGACATCTAGTGAAAATTACCGGGTGCCATACAAAATGAATCAAATTTCTTTTCTTGAGCACATGAAGGTGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGTTGCTTTGGAGGCAGAAATTAGCTTCTTCAAGACTCGGCTTCGAAGATGTTGCCAGGGACATATTTTCTGTTGGTTGTCTCTTGGCAGAACTTCATATTTGCAAGCCACTCTTCGATTCAACCTCATTGGCAGTATACTTGGAGGATGGTATCTTACCAGGTCTCCTGCAGGAACTACCTCCTCATGTTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCAGCTAAAATTCTTCTGGAATCACCTTATTTTCCAAAGACTGTCAAGTCTTCCTACTTGTTTCTTGCTCCACTTCACCTTGTAGCTAAAGATGAAACACGTCTTTGTTATGCTGCAAATCTTGCAAAGCAGGGAGCTCTATGGGAAATGGGCACCTTTGCAGCTGAAATGTGTGCTCCTTACTGCTTACCACTTGTATTAAATGCTGTAAATGATTCTGAAGCAGAATTGGCATACATACTACTGAAAGAATTCATCAAATGCTTAACAGGACATGCAGTGAAAATTTTGATCTTGCCAACCATACAGAAGATTTTACAGGCTAGTTTCGAAATTTATTTTCTAACCACAGGTTATTTACATCTGAAGCTGTCCTTTTTACAAGATTCATTTGTACGTGAGATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATCCACCCGTTGGTCTTGTCAAACTTGTATATTTCTTCGAATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATTGGTTCCAGTGAGGAGCTCGGGTTGCCTATCACAATCCATCAGACAATCTTGCCTCTTGTCCACTGCTTTGGGAAAGGATTATGTGCTGATGGAATTGATGTGCTGGTCAGAATTGGTGGAATTTTTGGGGAATCCTTTATTGTCAAACAGATGCTTCCACTACTGAAAAATGTTGCTCGTTCCTTCATTGATGTTTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTGGCGCTTATTGATTGTTTGATGACGTTAGATGGCCTTGTAGCTTTCTTGACAGTAGAGGTTATTGTAAAGGAGCTTCTTGAAGACCAAGTTTGCATACACGTTGGGGTTCTTATGCTGAAACATATGGAAATTGCAGTGCTTCAGGTTGCTGCTACTACTCTCTTTGGAATTTGTCAGCGGATTGGGGCTGATTTGACGGCATTGCATATTCTACCAAAACTGAAAGAACTATTTGATGACCTTGCTTTTTCCCAGGAAGTCTCTAAAGGTTCGACTACTGTTGGCCGAAACTTGAAGGCTGCCAAATTAAAAATTGGTGGGGACTTGCAAATTGAAAGTTATATGGATCTAGTTTTGGTTCTCTATACTTCTTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCTACGCCATCATAATTGGAAATGGGAATATGCAGGAGAATCATCAAAGGGTGGTTCAGAAATTATTATTACTAGAAGACCTTCAAGTTCCCAGGGCTTCACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGGTGGTCAATTCCACAATCCCAAGGAAGTAGAAATGCCAAAAACTTGATTCCTCAGAGACGACCATTTAAAGCTCATCAAAATCCAGCAGGAATGCAGGAAGGAGTAGCATACCAGATGAACCATGAGCCCTGGTTTTGGTTCCCCAGTCAAACCACCATTTGGGATGGGCCTGAATTTCCTGGGAGGATGGGAGTTCAGAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTTATACACTCTATACGTGCACATCACGGAGCAGTGAGGTCCCTGGCTGTTGATCAAGATGAATGTACTGTTTTCACTGCAGGAATTGGCCAAGGGTATAAAGGAACTGTTCAGAAGTGGGAACTAAGCCAAACTAACTGTTTGTCTGGCTATTATGGCCATGAGGAGGTTGTGAACGATATTTGCATATTATCATCTAGTGGAAGAGTGGCATCTTGTGATGGAACAATTCATATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGCCGAGTCCCAAGCAGAATCTGTCCATCCTACTAGCCATCTATCCTCTGCGTCAAAAATTAACAGTGACCAGGCAAATGTGCTTAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCTTTTGATTCAAGCCTTTATACATGCATGCATCTGTTAGACTCTGCTGAAAATATTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTAATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGGGAGTCTAACGAATCTAGTTTTCCTTCTCTGATTTCTGCCATTTATTCCTATGGCTCTGAGAAGATGCAAGCAGGTGGAATTTCCACTTTGCCATCTTTAATTGCAACTGGACTAAGTTCTGGTCATTGTAAATTATTTGATACGAAGAGCAGAAATGTCATTGCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAGCATCTGCTCATTTCCAGCTCACTTGACAGAACTTTACGAGTTTGGGACTTAAGAATGAATTTGCCATCCCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATATGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGACTTCTCTCCTTGTCAAAGTCTGCCAATGAAACAGATGGGCAACATCACATTAATCCCCAGAGACTGTACATTTCAGATAATGGAATAAGAGGATTGTCAGCATTATCAAGCATTAGTATACTTCCATTCTCCAGATTGTTTCTCATTGGAACTGAAGATGGTTTTCTTAGAATCTGTTGTTAA 4959 0.4081 MEEESNCFDCLKLRINSDFGDEIVFNYGFSTSPLPFGSSAIVHISGGEASSAQFILQYISTLHKNCFTNYVNEYILDSSEGPRNDDNPHNGGTQYTNVVNGGIDSEDSETTKASSRNSTCNHSGRFSCSRTITSLAAIARVGVSSCSTLQDVASDFLSGLIEDHVLDSLNLLIEGKPSGRDSINFLSLIGLPSFEEDTFPGSLRHPNIVPVLAILRTSDHVNMVLPKTPYNLEHILHFNPNALKSDWHRRFLIYQLLSALVYLHGLGVSHGNICPSNIMLTDSLWSLLRLWSETVMDSNLTLQKSESVNSVPAKIGCCNSVCRSNGLYADLKLSPSVDWHSSFHQWWRGELNNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPYDNCDAGWRDLTKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLLMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYSDAQIFRSIHDGMADLAVPSWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFGYKMSGQAAVTAKNVMLPPSEPMMPRSTGRRQLFTRPHPIRHATARIRRHGTNKYAKVWSQENEMQQETTLLSETAYLQELEQASAFSEHARHLNACYHYPLNRIERNISSLGDPTTETSSENYRVPYKMNQISFLEHMKVEDEGSSGYPDLLLWRQKLASSRLGFEDVARDIFSVGCLLAELHICKPLFDSTSLAVYLEDGILPGLLQELPPHVRLLVEACIQKDWMRRPSAKILLESPYFPKTVKSSYLFLAPLHLVAKDETRLCYAANLAKQGALWEMGTFAAEMCAPYCLPLVLNAVNDSEAELAYILLKEFIKCLTGHAVKILILPTIQKILQASFEIYFLTTGYLHLKLSFLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISSNKSSAASASVLLIGSSEELGLPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGESFIVKQMLPLLKNVARSFIDVSCMNKPDPVQSWSALALIDCLMTLDGLVAFLTVEVIVKELLEDQVCIHVGVLMLKHMEIAVLQVAATTLFGICQRIGADLTALHILPKLKELFDDLAFSQEVSKGSTTVGRNLKAAKLKIGGDLQIESYMDLVLVLYTSFASLLGIEKLRQCCATWLLLEQFLLRHHNWKWEYAGESSKGGSEIIITRRPSSSQGFTSEYNPAKLLLNGVGWSIPQSQGSRNAKNLIPQRRPFKAHQNPAGMQEGVAYQMNHEPWFWFPSQTTIWDGPEFPGRMGVQKDDLPWKIRASVIHSIRAHHGAVRSLAVDQDECTVFTAGIGQGYKGTVQKWELSQTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESQAESVHPTSHLSSASKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDSAENIVVGTGNGSLRFINVARGQKLHIWRGESNESSFPSLISAIYSYGSEKMQAGGISTLPSLIATGLSSGHCKLFDTKSRNVIASWRAHDGYVTKLAAPEEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSANETDGQHHINPQRLYISDNGIRGLSALSSISILPFSRLFLIGTEDGFLRICC 1652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0019 1652 Gene3D Transferase(Phosphotransferase) domain 1 195 289 - -
Lal12g0019 1652 ProSiteProfiles Protein kinase domain profile. 135 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0019 1652 MobiDBLite consensus disorder prediction 85 124 - -
Lal12g0019 1652 SUPERFAMILY Protein kinase-like (PK-like) 201 791 IPR011009 -
Lal12g0019 1652 Gene3D Transferase(Phosphotransferase) domain 1 688 784 - -
Lal12g0019 1652 Gene3D BEACH domain 336 575 IPR036372 -
Lal12g0019 1652 SUPERFAMILY BEACH domain 334 575 IPR036372 -
Lal12g0019 1652 CDD PKc 202 283 - -
Lal12g0019 1652 ProSitePatterns Trp-Asp (WD) repeats signature. 1541 1555 IPR019775 -
Lal12g0019 1652 SMART serkin_6 126 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0019 1652 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1523 1556 - -
Lal12g0019 1652 SUPERFAMILY WD40 repeat-like 1291 1650 IPR036322 GO:0005515
Lal12g0019 1652 SMART WD40_4 1335 1372 IPR001680 GO:0005515
Lal12g0019 1652 SMART WD40_4 1516 1554 IPR001680 GO:0005515
Lal12g0019 1652 SMART WD40_4 1289 1332 IPR001680 GO:0005515
Lal12g0019 1652 SMART WD40_4 1610 1652 IPR001680 GO:0005515
Lal12g0019 1652 SMART Beach_2 343 575 IPR000409 -
Lal12g0019 1652 ProSiteProfiles BEACH domain profile. 331 600 IPR000409 -
Lal12g0019 1652 ProSiteProfiles Trp-Asp (WD) repeats profile. 1523 1556 IPR001680 GO:0005515
Lal12g0019 1652 PANTHER GH12955P 1 1652 - -
Lal12g0019 1652 Pfam WD domain, G-beta repeat 1337 1372 IPR001680 GO:0005515
Lal12g0019 1652 Pfam WD domain, G-beta repeat 1519 1554 IPR001680 GO:0005515
Lal12g0019 1652 Gene3D - 1492 1652 IPR015943 GO:0005515
Lal12g0019 1652 Gene3D - 1285 1491 IPR015943 GO:0005515
Lal12g0019 1652 CDD Beach 345 575 IPR000409 -
Lal12g0019 1652 Pfam Protein kinase domain 201 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0019 1652 Pfam Beige/BEACH domain 345 554 IPR000409 -
Lal12g0019 1652 MobiDBLite consensus disorder prediction 78 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0019 Lal-Chr12 158637 169330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0019 1289 1555 Miscellaneous Gene Families AT5G08390 21.481 1.22e-06 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Lal12g0019 Beach 1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0019 K17601 - gmx:100809116 2781.13