Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0009 ATGGTTACAGCTCAAAATAATTCAATTAAATTGGGGTCCAGTATTGTTGCTGGCACTAATTCATCATGGCAATCACCCTCTAGTGATTTTGCCTTTGGATTCTACCCTCTTGTTACTGGTCACTATCTTGTTGGAATTTGGTTTCATAAGATTCCAAATAAAACACTAGTTTGGTCTTCTAACCGAGATGATCCAGCTCAAATAGGATCAACCATCAATCTTACACTCAGTGGTCAATTTGTGCTACAACATGCTAACAACACTTCATTTCCAATATACAATGCTACTACCAATAGTGCAACTTCTGCTATGATGCAGGACAATGGTAATTTCATCTTGTTCAACTCTCTTTCAACCATATGGGAGAGCTTTCATTCACCAACAGATACAATTCTACCAGGCCAAACTTTAAAGATTGGTCAGATACTTTATTCCAATGCCAATATTACAACACAAGATTACTCAACAGGACAATACAAGTTGGAGGTTCAGACTGATGGTAACATTGTTATATCTGCATTTCGATTTGATGATCCTGGATACTGGTACACTTCAACTGATCATAATACAAATGTCACACTTGTTTTTAATAACACCACAGCTTTTCTTTATGCTGTCAATGGCACACACAACATATTCAATATGACCACAGCTACACAAGTGCCTAATCCAATACATAATTACTCTCATCGCGCAACGATCAATGACCATGTAAATTTTCAACAACTGATTTACCTTAAAGAAAGTGGAAATCAGTGGACAACTATATGGGAGGCCATAACACAGCCCTGCACCGTGAATGCTATTTGTGGTGTCTATGGCTTTTGCACTTCACCTGACAATAGGACAATCAGTTGTAATTGTTTGCCAGGTTACACACCTTTGGATCCAAGTGTTCCCTCCAGAGGGTGCTATCCTAAAGTTGTCATGGATTTCTGTTCTTATAATTCATCTTCATCATCAAACTTCACTGTGGAAGAAATTCAAGATGCTGATATACCAAACCAAATATATTCTGATCTGCAAAGGGTAGACTCTTCTGATCCGAACAGTTGCAGGAGTGAGGTTGTTTATCTAGTAGCTCTATCAGCATGCTCCTTTTTTGCTATCGTGTTTGCAACTATTGCTATCTATCATCACCCAACATTTCAAAATCTCGTGCATAAAGGGTCACCCCCAAAGCCAGACCCTGTGGACATCAATCTAAAGTCATTTTCATTCCAAGAGTTGAGAGAAGCAACAAGCTGGTTCAGGAACACACTTGGCCAGGGAGCCTTTGCTATAGTATATAGTGGTGTTTTAACCTTGGAGGGTGAACAAGTTGAGGTTGCTGTGAAAAAACTTGAAAAACTTGAAGAAAAAGGTGAGAAAGAATTTGTGAATGAAGTTCAAGTAATTGGTATGACTCATCATAAGAATCTTGTAAGGTTATTGGGTTTCTGCAATGAGCAGAATCATCGACTTCTTGTATATGAGATGATGAGAAATGGTACGTTATCCAATTTCCTTTTTGGGGAGGAGGATATACCAAGATGGGAAGATAGAGCCAAAATTGTTGTAGAAATTGCTAGAGGCTTGATATTTTGGACTGGCAAAACTACTAACGAAAGACAGAACAAGAACAAGTACGCATGTTGTAAGAGAAGGCACATTGAGTTACATCAAATTGAAGATGGTGGTGATGAATTGATACTTATAGATTGGGTTCTTCATTGGGCAAAAGAAGGGAATCTAAGAGTTATTGTGAGCCATGATCTTGAAGTTGTTAATGATTTCAAGAGGTTTGAGAGAATGACAATGGTCGGGTTGTGGTGCTTATGTCCTAACCCAACTCTTAGACCATCTATGATAAGAGTGCTACAGATGTTGGAAGGAAACATAGAAGTTGGTGTTCCACCATTGTTTGATGGGAAAATGTTGTAA 1923 0.3843 MVTAQNNSIKLGSSIVAGTNSSWQSPSSDFAFGFYPLVTGHYLVGIWFHKIPNKTLVWSSNRDDPAQIGSTINLTLSGQFVLQHANNTSFPIYNATTNSATSAMMQDNGNFILFNSLSTIWESFHSPTDTILPGQTLKIGQILYSNANITTQDYSTGQYKLEVQTDGNIVISAFRFDDPGYWYTSTDHNTNVTLVFNNTTAFLYAVNGTHNIFNMTTATQVPNPIHNYSHRATINDHVNFQQLIYLKESGNQWTTIWEAITQPCTVNAICGVYGFCTSPDNRTISCNCLPGYTPLDPSVPSRGCYPKVVMDFCSYNSSSSSNFTVEEIQDADIPNQIYSDLQRVDSSDPNSCRSEVVYLVALSACSFFAIVFATIAIYHHPTFQNLVHKGSPPKPDPVDINLKSFSFQELREATSWFRNTLGQGAFAIVYSGVLTLEGEQVEVAVKKLEKLEEKGEKEFVNEVQVIGMTHHKNLVRLLGFCNEQNHRLLVYEMMRNGTLSNFLFGEEDIPRWEDRAKIVVEIARGLIFWTGKTTNERQNKNKYACCKRRHIELHQIEDGGDELILIDWVLHWAKEGNLRVIVSHDLEVVNDFKRFERMTMVGLWCLCPNPTLRPSMIRVLQMLEGNIEVGVPPLFDGKML 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0009 640 ProSiteProfiles Bulb-type lectin domain profile. 1 126 IPR001480 -
Lal12g0009 640 Pfam Protein tyrosine and serine/threonine kinase 418 530 IPR001245 GO:0004672|GO:0006468
Lal12g0009 640 Gene3D Transferase(Phosphotransferase) domain 1 543 629 - -
Lal12g0009 640 Coils Coil 434 454 - -
Lal12g0009 640 Pfam S-locus glycoprotein domain 226 294 IPR000858 GO:0048544
Lal12g0009 640 Gene3D - 1 124 IPR036426 -
Lal12g0009 640 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 545 636 - -
Lal12g0009 640 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 354 528 - -
Lal12g0009 640 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 357 - -
Lal12g0009 640 ProSiteProfiles Protein kinase domain profile. 415 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0009 640 Gene3D - 125 221 IPR036426 -
Lal12g0009 640 Gene3D Phosphorylase Kinase; domain 1 394 493 - -
Lal12g0009 640 Pfam D-mannose binding lectin 55 142 IPR001480 -
Lal12g0009 640 ProSitePatterns Protein kinases ATP-binding region signature. 421 447 IPR017441 GO:0005524
Lal12g0009 640 PANTHER SERINE/THREONINE-PROTEIN KINASE 545 636 - -
Lal12g0009 640 PANTHER SERINE/THREONINE-PROTEIN KINASE 354 528 - -
Lal12g0009 640 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 357 - -
Lal12g0009 640 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 186 IPR036426 -
Lal12g0009 640 SMART blect_4 14 127 IPR001480 -
Lal12g0009 640 SUPERFAMILY Protein kinase-like (PK-like) 394 528 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0009 Lal-Chr12 74291 76770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0009 381 529 Receptor kinase-like Gene Family AT3G19300 36.000 1.28e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal12g0009 PK_Tyr_Ser-Thr 2.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0009 - - aprc:113871840 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0009 12 74291 76770 Lal12g0009 12 74291 76770 ECH