Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1596 ATGGGTCTTAAAGACATAGGTGCTTCACTTCCTCCTGGGTTTCGGTTTTATCCAAGTGATGAAGAGTTGGTGTGTCATTACCTTTACAAAAAGATCACAAATGAGCAAGTTTTGAAGGGTACCTTGGTCGAAATTGACTTGCACATATGTGAACCATGGCAGCTTCCTGAGGTGGCTAAGCTGAACGCAAATGAATGGTACTTCTTCAGCTTTCGTGATAGAAAATATGCAACTGGGTTTCGAACCAATCGAGCAACGACATGTGGGTATTGGAAAGCAACAGGGAAGGATCGAATGGTGGTGAATCCAATGACAAAAGAGGTTGTAGGGATGAGGAAGACATTGGTGTTCTATAGGAACAGAGCTCCAAATGGAATCAAAACTGGTTGGATCATGCATGAGTTCCGCTTACAGACCCCACATATGCCTCCTAAGGAAGACTGGGTGCTGTGTAGAGTCTTTCATAAAAGCAAAGAAGATAGCAACAATGTCAAATTCAACAACACACAACTACTCATGTATGAAAACACATCTCTATCACCAACCAACCAAACCATTATGCCTAGTCATGGGTATAATAGACTTGCCTCATTCTCTTCCTCCATGGTAATCCATCATCATTTAAACACCAACAATACCACTCTTATTACTCAAATTGCTCCCAAATGTAATGATGACTATGAATTCTTATGGGACAAGGATTTGGAAGAAGTTAGCTTAGAAGATGGCTTGGCTTCAAACTTGGACGGAATTAGATTCGAGGTCGATAATAATAATAATATGGTCTTGTTATAA 795 0.4038 MGLKDIGASLPPGFRFYPSDEELVCHYLYKKITNEQVLKGTLVEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTCGYWKATGKDRMVVNPMTKEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLQTPHMPPKEDWVLCRVFHKSKEDSNNVKFNNTQLLMYENTSLSPTNQTIMPSHGYNRLASFSSSMVIHHHLNTNNTTLITQIAPKCNDDYEFLWDKDLEEVSLEDGLASNLDGIRFEVDNNNNMVLL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1596 264 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lal11g1596 264 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Lal11g1596 264 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 258 - -
Lal11g1596 264 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 258 - -
Lal11g1596 264 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lal11g1596 264 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1596 Lal-Chr11 18923740 18926699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1596 6 159 NAC Transcription Factor Family AT1G56010 58.025 1.90e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1596 NAM 4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1596 - - gmx:100782751 409.453