Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal11g1591 | ATGTCTCCTCCACATACTATAATTCTTTCACTTTTCATCATTTTCATCTCATTTGATTTGTCCTTTGGCTTTTACATAGAGGACAAACATTATCAAACAAATTATCAACATTACACTACTACTGCACCTACAAGGTTGATGAGAATGACCCATATGTCTCAACAAATGGTTAATGTTGATAACTATGGAGCAATTGCTAATGATGGAAGAGATGATACTGAGGCCTTTGAGAAGGCATGGAATGAAGCATGTTCTATAGGGGCAATTCTTGTGGTACCTGAAAAGAGAGTCTATCATCTTAAGCCTATAACATTTTCAGGTCCATGCCAACCCAATACTGCCTTTAAGGTATATGGAACAATCAAAGCATGGCCTCATATGTCAGCATATGAGAAAGATAGACGGATATGGATTATGTTTGATAGTATCATGAATCTCGTAGTTGATGGTGGTGGTATCATCAATGGTAATGGTAGAAAATGGTGGCAGAACTCTTGCAAAGTTAACAAAAGCCTTCCATGCAAAGAAGCACCAACTGCTGTGACTTTCTATCAATGTAACAACTTGCAAGTGAAAAATCTCAAGTTCAAAAATGCACAGCAAATGCATGTTAGGTTCCAGAAATGCTTCAATGTTAGAGCTTCAAATTTGTTGGTCAAAGCACCAGGGAACAGTCCTAACACTGATGGAATTCACATCACTGGAACACAAAATATGATCATAAGCAACAGTATCATTGGTACAGGTGATGACTGTATTTCAATAGTTAGTGGGTCCAAAAACATTCGTGCCATTGGTATCACTTGTGGACCAGGACATGGAATAAGCATTGGAAGCTTAGGAGCTGATAACTCAAAAGCTGAAGTCTCGAATGTGATAGTGAACAGAGCCACCTTAACCGGAACCACTAATGGAGTTAGAATAAAGACTTGGCAGGGGGGTTATGGGTATGCAACAAATATCAAATTTATGAACATGGCAATGCGAAATGTGACTAATCCCATAATCATAGATCAAAACTACTGTGATCAGAAAGAACCATGCCAAGAGAAGGAGTCAGCAGTAGCATTGAGTAATGTTGTGTACCAAAACATTAGAGGAACTAGTGCCTCAGAAGTGGCAATCAAATTTGAATGTAGCAAAACAGTCCCATGCAGAGGAATCTACATGCAAAATGTGATTTTAACACCTGAAGATGGTGATGGTATCAGTGCTACATGGTTGCCAGAGGGTTCCTCTGATTGTGGTGAAAAGCTAGCTAGCCTCATTTTTGAAGTGTTTATAAACTTTGCAGTATTTCTTACTATGGTCATTTTGTGCAATGGTTTACATTTCATACTAAAGCCTTATTCACAACCTCGCATTACTTCTGACATAATTGCAGGACTAGCCTTAGGCAACATTGGACATGTACGTACCCTATTTGATAGTTTCAACAAGGCCTTTGGATTCATCATTGATTTTGGTATGATGTGTTACATGTTTGCATTGGGCATAGAAATGGATTCTCATGTACTCTTCAACCACCTACCTAGACAAACTAAAGCCGCTTATGGAGGACAAATCTTCACTTTCGTCTTAACCGCTTTGGCAACCCCTTTCTTGGCTTACTTTGATGAAAATAAAATACTAGAATTCACCCTCTGTCTTGCCCTTGCTGTTTCAAGCACCGCCTCCCCTGTCCTCACCCGTTTAATAACTCATCTCAAAATAGGCAAGTCAGATATCGGGAAGATCGTCATCGCTGGAGGGATGCACTCAGATTTTATAGCATCTTTGTTCCTTTCAATTGGTTACATATTTGTTCCAATGGCATTGTTCTGTGGTGATTTTCAAGCAACACAAGGTCTTAACAAGGCCTTTACAATGGCAGGTGCAGTTCTGGGTCAGACAGTGTTTGCAGCCAGTTTTGGACCATTTTTCATGAATTGGATTAACAATGAAAACCCTGAAGGTAGACCAATGAAAGGTGTTTGTTTGCCCCGGGAGGGTAGAGTTTCCAAATGGGTTATTACCAAAATCAATTATATGTTGACCACCATATTTTTCCCCATATTTTTCTTGTGGATGGGGTATGAAGCTGATTTCAACAAGTTTCATTTTCGAAGTCGCGGAGCATGGGCAAAATTCTTTACACTTATTATAGTAGGGACTGCAGGTAAGATTGCTGGAACAGTTATTTCTGGGACAATGCTGGGATTTCACTGGCCTGAATCAGTTGCAATAGGGTTGCTCCTCATCACCAAGGGTCACTTACATATCTACTTGGCTGTCAAATCAATGAATTGTGGTGCAAATACCTCCACAGGCATTGGGATGATAATTGCAATATTTTTCACAGTTGTGCAAGGGCCAACAGTTGTGGCAAATATCATCAAACGGGCGAGGAAAAGGGCACCTAGTCATCACATGGCCCTTCAATTGCTTGACCCAACAAGTGAGCTAAGGATCCTCCTATGCCTTCATGGACTTCATAATATTCCTGCTTCCATAAACTTCATGGAGATCTCAAGAGGGTCATCAGACCCTGGCATTCTGATATATGTCGCGGACATGATTGAACTCACTGATGACATATCAGTCACATTGGATAGGGATGAAGGAGTACATACAGCCACTGTTAAAGACAAGGAAGTCATGGACATGAGAGACAAAGTTACTGACTCATTCCAAACCTATGTGGCAGAAAATAGTGATGGTATTACTCTCAAAAGAACAATGGCACTCTCAACCATCAATAACATGCCTCAAGATATCTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTACCATTCCATAGGAGCCACCGCTCCGAAGGAACCTTCGATGGTGGTAATCAAGGGTTCAGATATGTGAACCGAAAGGTACTGAGAGGTGCCCCTTGTTCCGTTGGGATTCTAGTGGACAGAGGCCTTGGATCCATTGATCATATATCAGCATCTCAAGTAACAATCAATGTGGCAGTCATATTCATTGGAGGGAAAGATGATAGGGAAGCACTTGCCTATGCTAGCCGTGTAGCACGGCATCCAGGAGTAAAAGTCACAATAATAAGATTGTTGGTAGATCCAAATGCAGAGTCCTCAAGATTAGTGAGGTATAGGGTCATCCATGAAGAAGAAGAAAATGAGATGAAGTTGGATGATGAATATTTTGCGCATTTCTATGAAAGGCATGTAGTAGGAGGCCGTATTTCGTATACAGAGAAGCATCTAGCAAATGCTGCTGAGACATTTTCTACTCTCAGGTCATTTGAAGGGCAATACTCATTGGTCATTGTTGGAAGAGAAGGAGGAATGAACTCTATATTGACAAGGGGAATGAATGATTGGCAGCAATGCCCTGAACTAGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAATGACTGTCTCTGTGTTGATCATCCAACAACACAAAATTAAAGGAGATCTTGATGGATTAGATGATGACTTCTCTATCATGTAG | 3483 | 0.4065 | MSPPHTIILSLFIIFISFDLSFGFYIEDKHYQTNYQHYTTTAPTRLMRMTHMSQQMVNVDNYGAIANDGRDDTEAFEKAWNEACSIGAILVVPEKRVYHLKPITFSGPCQPNTAFKVYGTIKAWPHMSAYEKDRRIWIMFDSIMNLVVDGGGIINGNGRKWWQNSCKVNKSLPCKEAPTAVTFYQCNNLQVKNLKFKNAQQMHVRFQKCFNVRASNLLVKAPGNSPNTDGIHITGTQNMIISNSIIGTGDDCISIVSGSKNIRAIGITCGPGHGISIGSLGADNSKAEVSNVIVNRATLTGTTNGVRIKTWQGGYGYATNIKFMNMAMRNVTNPIIIDQNYCDQKEPCQEKESAVALSNVVYQNIRGTSASEVAIKFECSKTVPCRGIYMQNVILTPEDGDGISATWLPEGSSDCGEKLASLIFEVFINFAVFLTMVILCNGLHFILKPYSQPRITSDIIAGLALGNIGHVRTLFDSFNKAFGFIIDFGMMCYMFALGIEMDSHVLFNHLPRQTKAAYGGQIFTFVLTALATPFLAYFDENKILEFTLCLALAVSSTASPVLTRLITHLKIGKSDIGKIVIAGGMHSDFIASLFLSIGYIFVPMALFCGDFQATQGLNKAFTMAGAVLGQTVFAASFGPFFMNWINNENPEGRPMKGVCLPREGRVSKWVITKINYMLTTIFFPIFFLWMGYEADFNKFHFRSRGAWAKFFTLIIVGTAGKIAGTVISGTMLGFHWPESVAIGLLLITKGHLHIYLAVKSMNCGANTSTGIGMIIAIFFTVVQGPTVVANIIKRARKRAPSHHMALQLLDPTSELRILLCLHGLHNIPASINFMEISRGSSDPGILIYVADMIELTDDISVTLDRDEGVHTATVKDKEVMDMRDKVTDSFQTYVAENSDGITLKRTMALSTINNMPQDICVLAEDLMIALIILPFHRSHRSEGTFDGGNQGFRYVNRKVLRGAPCSVGILVDRGLGSIDHISASQVTINVAVIFIGGKDDREALAYASRVARHPGVKVTIIRLLVDPNAESSRLVRYRVIHEEEENEMKLDDEYFAHFYERHVVGGRISYTEKHLANAAETFSTLRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGPDFSMTVSVLIIQQHKIKGDLDGLDDDFSIM | 1160 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal11g1591 | 1160 | ProSitePatterns | Polygalacturonase active site. | 266 | 279 | IPR000743 | GO:0004650|GO:0005975 | |
| Lal11g1591 | 1160 | PANTHER | CATION/H + ANTIPORTER | 415 | 657 | - | - | |
| Lal11g1591 | 1160 | PANTHER | CATION/H + ANTIPORTER | 655 | 1158 | - | - | |
| Lal11g1591 | 1160 | Pfam | Glycosyl hydrolases family 28 | 90 | 397 | IPR000743 | GO:0004650|GO:0005975 | |
| Lal11g1591 | 1160 | CDD | USP_Like | 989 | 1101 | - | - | |
| Lal11g1591 | 1160 | SUPERFAMILY | Pectin lyase-like | 46 | 405 | IPR011050 | - | |
| Lal11g1591 | 1160 | Pfam | Sodium/hydrogen exchanger family | 657 | 787 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
| Lal11g1591 | 1160 | Pfam | Sodium/hydrogen exchanger family | 432 | 640 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
| Lal11g1591 | 1160 | Gene3D | - | 428 | 658 | IPR038770 | - | |
| Lal11g1591 | 1160 | Gene3D | - | 843 | 1113 | - | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal11g1591 | - | - | cam:101501359 | 1043.88 |
Showing 1 to 1 of 1 entries