Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1573 ATGGCATCAAGACCCGTCGTTCCACTTCAACAACAACACGCAAGAGGTGAGGGGATGGTAGGAGGAAGGAGGAAGGAGGAGAAGAATAAGAATGGTGGAGCAGATGGAAAGAACCGCGTAGTACTTGGTGATATTGGGAATTTGGGTCGCGTTAAAGGCATTGATATCAATCTCAATCGCCCCATCACAAGGAGTTTATGTGCACAACTACTTGCCAAAGCAGAAGCTGGTGAAAATAACAAGAATTTGGCTATTCCTAATGTAACCGGTCCAAAGCCTCAAGTTGCTGATGGAGTTGTTGCTAAAAGAAGAGTGGCACCAAAGCCAGCAGAGAAGAAAGTCACTGCAAAACCAAAGCCTGCGGAAGTCGTTGAAATCAGCCCGGACGAAGAGGTTCAAAAAGACAAGTCTGTAAACAAGAACAAGGAAGGAGGAGATGCTCTCTCCAAAAAGAAATCACAAACACTTACTTCAGTCCTCACAGCTAGAAGCAAGGCAGCATGTGGTTTGACTAAAAAACCAAAGGAGCAGATTATAGACATTGATGCTGGCGATAATGCCAATGAACTTGCTGCTGTGGAATACATTGAAGATATGTACAAGTTCTATAAGCTGGCAGAGAATGAGAGCCGTCCAAATCAGTATATGGATTCACAACCTGAGATAAATGAGAGGATGAGAGCCATATTGGTCGATTGGCTTATAGATATTCAAACCAAATTTGACCTTTCACTTGAAACCCTTTACCTCACCATCAACATAGTTGATCGGTTCCTCGCGGTCAAGACTGTGCCAAGGAGGGAACTGCAATTGGTTGGTGTTAGTGCCATGCTCATGGCATCCAAGTATGAAGAAATTTGGCCCCCTGAGGTTAATGACTTCGTTTGCCTCACAGATAGAGCATACACTCATGAACAGATACTGGTCATGGAGAAAATCATTCTAGGAAAGCTGGAATGGACTTTGACTGTGCCTACACCTTTTGTTTTCCTTAGTCGTTTTATCAAGGCATCGATTCCAGATCAAGAGTTGGAAAACATGGTTCATTTCCTTTCTGAGTTGGGAATGATGCATTATGCCACCTTAGTGTACTGTCCCTCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGGTGCACTTTGAACAAGACCCCCATTTGGAATGAGACGCTTAAGCTACATACGGGTTATTCAGAAGAACAACTCATGGATTGTGTCAGAATGTTAGTAAGCTTCCATTCTACACTTGCAAATGGAAAGCTTAAGGTTTTGTATAGGAAGTATTCGGACCCGCAGAGAGGAGCCGTGGCGATGCTTCCACCAGCTAAAAGTCTCATGCCTGAAAGTTCTTGTGGCTCTAGAGTTTAA 1368 0.4393 MASRPVVPLQQQHARGEGMVGGRRKEEKNKNGGADGKNRVVLGDIGNLGRVKGIDINLNRPITRSLCAQLLAKAEAGENNKNLAIPNVTGPKPQVADGVVAKRRVAPKPAEKKVTAKPKPAEVVEISPDEEVQKDKSVNKNKEGGDALSKKKSQTLTSVLTARSKAACGLTKKPKEQIIDIDAGDNANELAAVEYIEDMYKFYKLAENESRPNQYMDSQPEINERMRAILVDWLIDIQTKFDLSLETLYLTINIVDRFLAVKTVPRRELQLVGVSAMLMASKYEEIWPPEVNDFVCLTDRAYTHEQILVMEKIILGKLEWTLTVPTPFVFLSRFIKASIPDQELENMVHFLSELGMMHYATLVYCPSMVAASAVFAARCTLNKTPIWNETLKLHTGYSEEQLMDCVRMLVSFHSTLANGKLKVLYRKYSDPQRGAVAMLPPAKSLMPESSCGSRV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1573 455 MobiDBLite consensus disorder prediction 104 152 - -
Lal11g1573 455 MobiDBLite consensus disorder prediction 1 38 - -
Lal11g1573 455 Pfam Cyclin, C-terminal domain 325 441 IPR004367 -
Lal11g1573 455 Gene3D - 212 323 - -
Lal11g1573 455 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Lal11g1573 455 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 26 448 - -
Lal11g1573 455 MobiDBLite consensus disorder prediction 18 34 - -
Lal11g1573 455 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Lal11g1573 455 Gene3D - 198 438 - -
Lal11g1573 455 SUPERFAMILY Cyclin-like 324 444 IPR036915 -
Lal11g1573 455 SMART Cyclin_C_2 325 442 IPR004367 -
Lal11g1573 455 CDD CYCLIN 323 410 IPR013763 -
Lal11g1573 455 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Lal11g1573 455 PANTHER CYCLINS 26 448 IPR039361 -
Lal11g1573 455 CDD CYCLIN 226 315 IPR013763 -
Lal11g1573 455 SUPERFAMILY Cyclin-like 188 322 IPR036915 -
Lal11g1573 455 MobiDBLite consensus disorder prediction 104 149 - -
Lal11g1573 455 SMART cyclin_7 329 411 IPR013763 -
Lal11g1573 455 SMART cyclin_7 232 316 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1573 Lal-Chr11 18774664 18777690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1573 1 446 Core Cell Cycle Gene Families AT4G37490 51.957 3.10e-147 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1573 K21777 - gmx:547919 650.203