Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1566 ATGAAAGCCTCCCTTCAAGTCATGGACATTTATTTGACTTTGGACACAATGCCCTTAAGGATTGCATCTGTTGGTGCTAAGTCAGTGTTATACTTTTCTAGTGCTTCTCTTGGTGCTAAGTCAGCATCTGTTGTGGAAGAAGCAAAAGAAAAAGGAACACCTGTGAACATCATTGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGATTGCATGGATCGATGGCGAGGTGACAGAAATCGATGGCAGGAATGCAAAAATCATTACTACAAATGGGAAAACTGTGGTGGCTGAAATTTCAAGAATATATCCTAAAGATACAGAGGCACCACCTGCAGGAGTTGATGATATGACCAAACTAGCATATCTACATGAGCCAGGAGTCCTATACAATCTTGCATGTCGATTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCAGTGAATCCGTTTCGAAGATTGCCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGGGCAGCATTTGGAGAGTTGAGCCCTCATCTTTTTGCTGTTGCAGACACATGTTACAGAGCAATGATCAATGAAAATGGAAGTCAGTCTATATTGGTAAGTGGAGAGAGTGGAGCCGGTAAAACCGAAACAACAAAAATGCTAATGAGATATCTAGCATTCATGGGGGGAAGATCTAACACAGAGGGAAGGACAGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGCCGTTTCGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGAAAGATTTCTGGAGCTGCGATCCGTACATATCTGCTTGAAAGGTCACGAGTTTGTCAGGCCTCTGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGTCAAAAAGTACAAGTTAGGGGATCCAAGGCAATTTCACTATCTTAATCAATCAAATTGTTATGAAGTATCAAATGTGGATGATGCAAAAGAATACTTAGAGACCAGAAATGCAATGGATATTGTAGGCATCAATCAAGATGAGCAGGATGCTATCTTTCGTGTGGTAGCCGCAATCCTACACCTTGGAAACATTAACTTCATGAAAGGGAAAGAATTTGATTCTTCCAAATTAAAAGATGACAAATCACTCTTCCACCTTCGAATAGTTGCAGAGTTACTCATGTGTGATGAGAAAGCACTAGAAGACTCACTTTGTCAGCGTGTCATTGTTACTCCGGATGGTAACATTACAAAACCACTAGACCCGGATGCAGCTGCTTTGAGCCGAGATGCATTGGCAAAGACTGTCTACTCCAGACTGATCGTAGACAAGATTAACAGTTCAATTGGTCAAGATTCCAATGCAATAAGCATAATAGGAGTCCTTGACATTTACGGATTTGAAAGCTTCAAAATAAACAGTTTCGAGCAACTATGCATCAACTTAACAAATGAGAAGTTGCAACAACATTTCAATCAGGCAAGGCTACAACTTCTAAATACACATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCTGGGGGAATAATAGCACTTCTTGATGAAGCTTGCATGTTCCCCAAGTCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAGGCACACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTTACATACCAAGCGGATTATTTTCTCGATAAAAATAAAGATTATGTTGTAGCAGAACATCAAGCTCTTTTATGGGCCTCCAAGTGCAATTTTGTTGCTAATCTTTTCCCTCCTTTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTACAATCTCTCATGGAAACACTGAGCACAACAGAACCACATTACATAAGATGTGTGAAACCAAATACAGTTCTGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGGAGTGCTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTCGATCGTTTTGGAATGCTAGCTCCCGATGTCCTTGATGGATCTGATGAGAAAAAGGCATCTATTGCCATATGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGAAAAACTAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCGAGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAGGCGCTTACAGAGACAAATCCGAACACATTTAACTCGAAAAGAGTTCATTACCCTGAGAAAGGCTACAATTCATATCCAAAAAACTTGGAGAGCAAAACTTGCACGTAAACTCTACAATGATATGAGGAGGGAAGCAGCTTCTATTAGAATACAGAAACATGTGCGTGCACACAGAACAAGAATGTATTATACGTCGTTACAAGCCTCAGCTATAGTTATTCAATCAGGGTTGAGAGCATTAGCTGCACGGAATGAATATAATTATAGAAGAAGAACAAAGGCTTCAATCAAAGTTCAGGCACAATGGAGAAGAACTCTGGCTCTTTTTTATTACAAACAACAGAAAAAAGCAACTATTACGCTTCAATGTTTGTGGAGAGCTAAAGTAGCGAGAAAAGAACTCAGAATGCTTCGGATGGCTGCAAGGGACGCAGGAGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAAGAGCTTACATGGAGACTAGATATAGAAAAACACATGAGGCTTGACCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAACTACAAAATGCTTTACAAGAAATGCAAGGTCAGATAGATGAAGCCAATGCTAAAATTATACTTGAGAAAGAAGCAGCAAAAATAGCAATTCAACAAGCACCACCAATAATTAAAGAGGTACCTGTTGTGGACAACACCAAGCTAGAGTTACTCACAAATAAAAATCAGGAGCTGGAGATTGAAGTAGAAGAGCTAGTAAAGAAGATTAAAGAGTTCCAAGTAAGGTTCTCAGAAATAGAAAATGAGAATCAAGCAAGGTTGAAAGAAGGAGAAGAAGCACATCTCAAAGCAATACAACTTCAGGAGACTATTGAAAGATTAGAATCGAGTTTATCAAACCTCGAGTCCGAAAATCAGGTTCTGTGCCAGCAGGCTTTGGAAGAATCAAAGAAAGAAGAACTTTCTGAAGAGATCAAAGTCCTCAAGGATCAGATAGCACATTTAGAATCAGAGAATGAATTTCTGCGGAGCCAGACAGCAGTTGCTGTAGAGCAGAAAGTTCATCCAGAAAAAACAGCAACAAACCAGGTCCAGGAAGTTGCTTTTGTTGAAAAGATTCAACAGAGAGTTATTTCAGATAATATGACTGCACAAATCAAGAATTTGGATAATGGAAATCAAATAGAGAAAGAACTCCATGCAAGAAAAGAACCAAGAGCACAAGTCTCCTTTCTTACAAAACAAAAATCACTCACAGACAGACAGCAGGAAAGTTATGATACACTTCTCAAGTGTCTCACGGAAGATAAGCGATTCGAGAAAAACAGACCTGCAGTTGCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTATTCACACCATTAGATCATCTATAGAGAGTCAAGGAGGAATGAATGATCTTGCATATTGGTTGTCAACAACTTCAACACTTCTGTTCTATCTACAATGCACACTCAAGGCTAATAATTCAATTAGGGCAGTGTCACGTAATCGAAACTCCCCAGCCACTCTATTTGGCAAAATGGCACAAGGTTTACGGTCATCTTCAATAGGCATGGGGTTTTCAAGTGGCTATAGTGGAATGGTGGACAAACCAAATGAGCAATCTAAAGTGGAAGCCAAGTACCCAGCTATTCTGTTTAAACAACATTTAACTGCATATGTTGAAAAGATATATGGAATGGTCCGTGATAGTTTAAAGAAAGAGATTAGTCCATTCCTAAATTTGTGTATTCATGCACCAAGATCAATAAGGACAAGATCAATAAGAGGGTCGTCTAGAAACATTCATTCAAATATAGTTGCAAAACAACAGGAATTGCACATGCACTGGAAAAGCATTGTCAACAAGTTAGATCATGCCTTGAGTACATTGTCAGATAACTATGTCCCTTCCATCATAACAAGAAAGATATTTAGTCAGGTTTTCTCTTTCATGAATGTTCAGCTCTTCAATAGTTTGTTGCTGCGCCGTGAGTGCTGCTCCTTTAGCAACGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAATTATGGTGTCTTAAAGCAACAGATCAGTTTGGTGGTTCATCTTGGGATGAACTCAAACACATTCGACAAGCTGTGGGATTTCTGGTTCTACATCAAAAGGCTCAAAAATCTTTGGAGGAGATCACAAATGAACTCTGCCCGGTGTTGAGTATTCCGCAAATATATCGCATCGGAACTATGTTTTGGGATGACAAGTATGGAGCACAAGGATTATCTCAAGAAGTCATTAGCAGAATGAGAGTGCTTATGACAGAAGACTCAATAAACATACCCAATAACTCATTCCTTCTGGAGGTGGACTCTGGCATACCATTGTTGATGGAGGAGATTTTTCGGAACATGAGTGACATCTGCCTATCAGATATGGATGTGGATCCACCACCAATTCTCAGCCAAAGGTCTGATTTCCAATTCTTGTTGCAACAAATGGACTCTCAATGA 4911 0.3942 MKASLQVMDIYLTLDTMPLRIASVGAKSVLYFSSASLGAKSASVVEEAKEKGTPVNIIVGSQVWVEDPEIAWIDGEVTEIDGRNAKIITTNGKTVVAEISRIYPKDTEAPPAGVDDMTKLAYLHEPGVLYNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQASDPERNYHCFYMLCAAPPEDVKKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGINQDEQDAIFRVVAAILHLGNINFMKGKEFDSSKLKDDKSLFHLRIVAELLMCDEKALEDSLCQRVIVTPDGNITKPLDPDAAALSRDALAKTVYSRLIVDKINSSIGQDSNAISIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQARLQLLNTHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLWASKCNFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLSTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARRLQRQIRTHLTRKEFITLRKATIHIQKTWRAKLARKLYNDMRREAASIRIQKHVRAHRTRMYYTSLQASAIVIQSGLRALAARNEYNYRRRTKASIKVQAQWRRTLALFYYKQQKKATITLQCLWRAKVARKELRMLRMAARDAGALKEAKDKLEKRVEELTWRLDIEKHMRLDLEEAKGQEIAKLQNALQEMQGQIDEANAKIILEKEAAKIAIQQAPPIIKEVPVVDNTKLELLTNKNQELEIEVEELVKKIKEFQVRFSEIENENQARLKEGEEAHLKAIQLQETIERLESSLSNLESENQVLCQQALEESKKEELSEEIKVLKDQIAHLESENEFLRSQTAVAVEQKVHPEKTATNQVQEVAFVEKIQQRVISDNMTAQIKNLDNGNQIEKELHARKEPRAQVSFLTKQKSLTDRQQESYDTLLKCLTEDKRFEKNRPAVACIVYKALLHWRSFEAEKTHIFDKIIHTIRSSIESQGGMNDLAYWLSTTSTLLFYLQCTLKANNSIRAVSRNRNSPATLFGKMAQGLRSSSIGMGFSSGYSGMVDKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMVRDSLKKEISPFLNLCIHAPRSIRTRSIRGSSRNIHSNIVAKQQELHMHWKSIVNKLDHALSTLSDNYVPSIITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFGGSSWDELKHIRQAVGFLVLHQKAQKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSQEVISRMRVLMTEDSINIPNNSFLLEVDSGIPLLMEEIFRNMSDICLSDMDVDPPPILSQRSDFQFLLQQMDSQ 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1566 1636 Gene3D - 302 360 - -
Lal11g1566 1636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 840 IPR027417 -
Lal11g1566 1636 Coils Coil 1027 1061 - -
Lal11g1566 1636 Pfam IQ calmodulin-binding motif 910 929 IPR000048 GO:0005515
Lal11g1566 1636 Pfam IQ calmodulin-binding motif 813 832 IPR000048 GO:0005515
Lal11g1566 1636 Pfam IQ calmodulin-binding motif 791 809 IPR000048 GO:0005515
Lal11g1566 1636 Pfam IQ calmodulin-binding motif 839 857 IPR000048 GO:0005515
Lal11g1566 1636 CDD MyosinXI_CBD 1212 1598 IPR037975 GO:0007015
Lal11g1566 1636 ProSiteProfiles Dilute domain profile. 1261 1575 IPR002710 -
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Lal11g1566 1636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 840 936 IPR027417 -
Lal11g1566 1636 Coils Coil 931 965 - -
Lal11g1566 1636 Gene3D - 722 784 - -
Lal11g1566 1636 SMART iq_5 907 929 IPR000048 GO:0005515
Lal11g1566 1636 SMART iq_5 811 833 IPR000048 GO:0005515
Lal11g1566 1636 SMART iq_5 884 906 IPR000048 GO:0005515
Lal11g1566 1636 SMART iq_5 836 858 IPR000048 GO:0005515
Lal11g1566 1636 SMART iq_5 788 810 IPR000048 GO:0005515
Lal11g1566 1636 SMART iq_5 859 881 IPR000048 GO:0005515
Lal11g1566 1636 Pfam Myosin N-terminal SH3-like domain 60 96 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 Gene3D Kinesin motor domain 115 717 IPR036961 -
Lal11g1566 1636 Gene3D - 787 839 - -
Lal11g1566 1636 Gene3D - 887 936 - -
Lal11g1566 1636 Gene3D - 840 886 - -
Lal11g1566 1636 PANTHER MYOSIN-12 1106 1628 - -
Lal11g1566 1636 PANTHER MYOSIN-12 70 1105 - -
Lal11g1566 1636 PANTHER MYOSIN 1106 1628 - -
Lal11g1566 1636 PANTHER MYOSIN 70 1105 - -
Lal11g1566 1636 SMART MYSc_2a 106 787 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Lal11g1566 1636 Coils Coil 1076 1137 - -
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 789 816 IPR000048 GO:0005515
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 908 937 IPR000048 GO:0005515
Lal11g1566 1636 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 58 107 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 Coils Coil 970 1004 - -
Lal11g1566 1636 CDD MYSc_Myo11 126 774 IPR036018 -
Lal11g1566 1636 Gene3D - 486 678 - -
Lal11g1566 1636 Pfam Myosin head (motor domain) 114 774 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 Pfam DIL domain 1451 1554 IPR002710 -
Lal11g1566 1636 ProSiteProfiles Myosin motor domain profile. 112 786 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 ProSiteProfiles IQ motif profile. 837 863 IPR000048 GO:0005515
Lal11g1566 1636 Gene3D Myosin VI head, motor domain, U50 subdomain 362 656 - -
Lal11g1566 1636 SMART DIL_2 1450 1557 IPR002710 -
Lal11g1566 1636 PRINTS Myosin heavy chain signature 142 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 PRINTS Myosin heavy chain signature 199 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 PRINTS Myosin heavy chain signature 246 273 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 PRINTS Myosin heavy chain signature 476 504 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1566 1636 PRINTS Myosin heavy chain signature 537 565 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1566 Lal-Chr11 18716281 18727480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1566 166 1633 Myosins gene family AT2G31900 72.234 0.0 2191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1566 K10357 - gmx:100817933 2747.23