Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1564 ATGTCATCTTTAGACCCTGGCAATATGCCTGACTTACCTGAGATGGACTTCAATTCAAGAGAGACTCTTAAGACAAATCATAGGAGTAGTGCAAATTCAGGAAATAATTCACCAACTCACCCAACAAAGATGAATGATACAGCAAAATATGCTAGCACAACTGAATTTTCAACAAGTGGAGTTGGAGTTGGATATGTAGACCAAGTTTCTAAAAATGATTCAAAGGTGACAAGTAAATCTAATAGACCTCATAAATTAGCACCATCAGCTAGAAACATTTCTGATTTCTCTACCCAAAGTCCAAGAACAAAAAAGCCTACAAATTTTGAGCCTGCAACTACCTCACCGAGACTTCCAACAGGCGTTACTAGGGGAATGTCCACCCATTCAAAGAACACCAATCAAGGCCCGGGCAGTGGCGCTAACTCTTGCAGCGAGAGTTTAGAGAGCACCAGTGCAACCATTAGGCCACACACTGGTGGTGATGTGAGGTGGGAGGCAATTAACATGGCTTCAAGGGGTGGCCCTCTCAATCTTAAAGACTTCAGGCTTCTCAAGCGGATCGGATATGGAGACATCGGGAGTGTATATCTTGTCGAACTTAAAGGAACCAAAGCTCACTTTGCCATGAAAGTGATGGACAAAGCAGCTCTTATCAGCAGAAATAAGCTTCTAAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCTACTTTATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTTATGGAGTTCTGTAGTGGAGGTGATCTTCATTCTCTTAGACAAAAGCAACTTAACAAGTGTTTCACTGAAGAAGCTGCAAGGTTTTATGCTTCAGAGGTTTTGTTAGCTCTTGAGTACCTTCACATGCTTGGCATTGTATATAGAGACTTAAAGCCTGAGAATCTTCTAGTCAGAGATGAAGGCCACATCATGCTCTCAGATTTCGACTTATCGCTTCGCTGTTCTGTTAGTCCTACCCTTGTCAAGTCTTCATCTGCCCATGTAAGCAATGGTGGTGGTGACTCTGGCGCCATATTAGGCGAAGAACAAGCAGTGCAAACTTGTACTCAGTCATCAACCTTTTTCCCTCGAATTTTGCCTTCAAAGAAGAACCGTAAGGCGAAATCAGATTTTGGCCTAATGGTCGGTGGAAATCGTCTTCCTGAACTGATGGCAGAACCAACCAATGTGCGCTCAATGTCATTTGTAGGGACACATGAGTATCTTGCTCCTGAGATTATCAAAGGAGAGGGGCATGGTAGCGCAGTCGATTGGTGGACTTTCGGTATCTTCTTATATGAACTGTTGCATGGAACAACCCCTTTTAAAGGTGCAGGATATAAGGCCACTCTTTTCAATGTTGTTGGGCAGCCATTGAGGTTCCCTGAAACACCTCAGGTTAGCGCCGTGGCTCGTGATCTTATAAGAGGATTGTTGGTGAAGGAACCTCAGAAGAGGATTGCATATAAAAGAGGAGCAACAGAAATAAAACAACACCCTTTTTTTGAGGGGATGAATTGGGCTCTAGTTAGAAGTGCTACACCACCTCATATACCAGAACCTATAGACTTTTCCAAGTTTGCTAGCAAAGACAAAGATACAACAGCACCAGCTGATAAGAAGATGGCAGATATTGCTAGTGATAATAACAGCAACAATTCTACTAATTCTTACATAGATTTTGAGTATTTTTAG 1728 0.4219 MSSLDPGNMPDLPEMDFNSRETLKTNHRSSANSGNNSPTHPTKMNDTAKYASTTEFSTSGVGVGYVDQVSKNDSKVTSKSNRPHKLAPSARNISDFSTQSPRTKKPTNFEPATTSPRLPTGVTRGMSTHSKNTNQGPGSGANSCSESLESTSATIRPHTGGDVRWEAINMASRGGPLNLKDFRLLKRIGYGDIGSVYLVELKGTKAHFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQLNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHVSNGGGDSGAILGEEQAVQTCTQSSTFFPRILPSKKNRKAKSDFGLMVGGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEPIDFSKFASKDKDTTAPADKKMADIASDNNSNNSTNSYIDFEYF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1564 575 Gene3D Phosphorylase Kinase; domain 1 179 265 - -
Lal11g1564 575 MobiDBLite consensus disorder prediction 540 560 - -
Lal11g1564 575 Gene3D Transferase(Phosphotransferase) domain 1 266 335 - -
Lal11g1564 575 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 30 575 - -
Lal11g1564 575 SUPERFAMILY Protein kinase-like (PK-like) 179 545 IPR011009 -
Lal11g1564 575 Pfam Protein kinase domain 387 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1564 575 Pfam Protein kinase domain 183 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1564 575 PANTHER FLIPPASE KINASE 1-RELATED 30 575 - -
Lal11g1564 575 ProSiteProfiles Protein kinase domain profile. 182 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1564 575 CDD STKc_phototropin_like 180 534 - -
Lal11g1564 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Lal11g1564 575 MobiDBLite consensus disorder prediction 1 156 - -
Lal11g1564 575 MobiDBLite consensus disorder prediction 24 156 - -
Lal11g1564 575 Gene3D Transferase(Phosphotransferase) domain 1 388 531 - -
Lal11g1564 575 SMART serkin_6 182 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1564 Lal-Chr11 18687896 18690452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1564 148 575 AGC Kinase Gene Family AT1G79250 74.049 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal11g1564 Pkinase 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1564 - - gmx:100819001 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1564 11 18687896 18690452 Lal11g1564 11 18687896 18690452 ECH
Lal11g1564 11 18687896 18690452 Lal1g1530 1 17484496 17488151 LSH
Lal11g1564 11 18687896 18690452 Lal9g0608 9 4122498 4124734 PCT