Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1551 ATGGGAGATGATAAGCAACATGAGAAAGGGTTTTTGTGTGAAAACCATAAATCAAGTGTCTCTAATTCTGATAACTCAGATGAGAGCAACAAAAAGTTAAAAATGAAAAAACCACTAAGCGAGGATGAAGAAGAAGGAAATGAAAGAGAGGGTTTTGTGAATAAGAAGCCAAAGATGCATGAAATCTGTAGTGGAATAAGTGATGAGAAGATTAATAATGTTGGTGTGAGAAAGTCTGATGAATCTAATAGTGAAATACATTTAAGAATTGAGAGAGAAAGAAGGAAAAAGATGAGAAACATGTTTTCAACTCTTCATGCTATGATTCCAGAACTTCCTTCTAAGGTGGACCAAATAACCATTGTTAATGAAGCAATGAACTACATCAAAAGTCTAGAGAAGACTGTGGAAATGCTAGAAAAACAAAAACAAGAAAGGCTCCAAACTATTTACCCATTTAGGTGTGAGTCATCTATGATCAACTCAAGGGAGACATTCATAGAAAATCATGAATCTTGCAATAACTTGGTGTGTGCAATGTCATCAAATTCAACCTCAACCTTAATCCCACAATATCCAGTTGCTTTTCAAACATGGTGTTCTCCAAATGTGGTCTTGAACATTTGTGGAAATAAAGCACAATTCTGTATTTACACAAATAACAATCTAGACCTCTTGACTACCATTGCTTCTGTCCTGGACAAGCATAACATAGAGGTCATAGCTGCTAACATTTGGTGCAATGATAATGGAAAAGGATGCATGATTCTAGCTCAGACAAATATAGTTTCTTCACATCAGTTTCCGGAAGCAACTTTGGTGGAGAAAATTTACAAGCAAGCTACTGAAGAAATTAAGCTATTGATCTCCTAA 873 0.3528 MGDDKQHEKGFLCENHKSSVSNSDNSDESNKKLKMKKPLSEDEEEGNEREGFVNKKPKMHEICSGISDEKINNVGVRKSDESNSEIHLRIERERRKKMRNMFSTLHAMIPELPSKVDQITIVNEAMNYIKSLEKTVEMLEKQKQERLQTIYPFRCESSMINSRETFIENHESCNNLVCAMSSNSTSTLIPQYPVAFQTWCSPNVVLNICGNKAQFCIYTNNNLDLLTTIASVLDKHNIEVIAANIWCNDNGKGCMILAQTNIVSSHQFPEATLVEKIYKQATEEIKLLIS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1551 290 SMART finulus 88 138 IPR011598 GO:0046983
Lal11g1551 290 PANTHER TRANSCRIPTION FACTOR BHLH95 13 288 - -
Lal11g1551 290 PANTHER - 13 288 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lal11g1551 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 160 IPR036638 GO:0046983
Lal11g1551 290 Coils Coil 122 149 - -
Lal11g1551 290 MobiDBLite consensus disorder prediction 1 55 - -
Lal11g1551 290 CDD bHLH_AtbHLH_like 87 140 IPR045239 -
Lal11g1551 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 82 132 IPR011598 GO:0046983
Lal11g1551 290 MobiDBLite consensus disorder prediction 27 55 - -
Lal11g1551 290 Gene3D - 74 157 IPR036638 GO:0046983
Lal11g1551 290 Pfam Helix-loop-helix DNA-binding domain 87 133 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1551 Lal-Chr11 18612711 18614346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1551 8 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 32.390 8.56e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal11g1551 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1551 - - lang:109333875 430.639