Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1546 ATGTCTCTCATTGAAACCAAGTACCATATAGTTCAACATAACCACACCAAAATAATGATAAATTTTCAAGCTTGTTCCTTTACCATCTTAAACTTGTTCTTTATTTATGCCCTCATCATCTTCTCAACTATAGCATCAGGTAACTCCTTATGTGACATAGAAGAAGCAAAATTAAGTGATTCAAGTGAAATTCTCCATTACAAAGTTGCTTCAATTGCTTCTGTTCTTGTTGCTGGTGCTCTTGGTGTGAGTCTTCCACTGTTGAGCAAAAAAATACCAACTTTAGATCCTCAAAATGACATATTTTTCATGGTTAAAGCTTTTGCAGCTGGTGTGATTCTAGCAACTGGATTCATCCATATACTACCTGAGTCATTTGAAAGCTTGACTTCACCTTGTTTGAAGGAAAATCCATGGGGGAAGTTTCCTTTTACTGGATTTGTTGCTATGTTGTCTTCTATAGTAACATTGATGGTTGATTCATTAGCTACAGGATATTACCAAAGACAACATTTTAATACTTCTAAGCAATTCCCTACTGATGAAGAAATTGGAGATGGACATGGACATGTTGATCATATACATCTTCATACACATGCAACACATGGTCATTCTCATGGTTCATCTAATTCTTCACAAGCTTCATTAACATCTGAGTTAATTAGGAAACGCATCATATCACAAGTGTTGGAGATTGGAATAGTGGTCCATTCAGTGATCATTGGAATATCATTGGGTACTGCTTCTAGCATTGATACCATAAAGCCACTCATGGTGGCCTTGTCTTTCCATCAATTTTTTGAAGGGTTGGGTCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCAAAGTCTACAACAATGATGGCTACATTTTTCTCCCTAACAACTCCAATTGGGATAGCAATTGGAATGGGAATATCAAGTATGTATAAAGAGAATAGCCAAAGTGCTTTAATTATTGAAGGAGTTTTCAATTCTTCTTCTGCTGGAATTTTGATTTATATGGCATTAGTGGACTTATTAGCAGCAGATTTTATGAGCCCCACATTACAGAATAATTTCAAGCTCCAAATTGGAGCAAATATCTCACTCCTCTTAGGTGCAGGTTGCATGTCTCTATTAGCCAAATGGGCTTAA 1140 0.364 MSLIETKYHIVQHNHTKIMINFQACSFTILNLFFIYALIIFSTIASGNSLCDIEEAKLSDSSEILHYKVASIASVLVAGALGVSLPLLSKKIPTLDPQNDIFFMVKAFAAGVILATGFIHILPESFESLTSPCLKENPWGKFPFTGFVAMLSSIVTLMVDSLATGYYQRQHFNTSKQFPTDEEIGDGHGHVDHIHLHTHATHGHSHGSSNSSQASLTSELIRKRIISQVLEIGIVVHSVIIGISLGTASSIDTIKPLMVALSFHQFFEGLGLGGCISQAKFESKSTTMMATFFSLTTPIGIAIGMGISSMYKENSQSALIIEGVFNSSSAGILIYMALVDLLAADFMSPTLQNNFKLQIGANISLLLGAGCMSLLAKWA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1546 379 PANTHER ZINC/IRON TRANSPORTER 34 379 - -
Lal11g1546 379 Pfam ZIP Zinc transporter 66 376 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal11g1546 379 TIGRFAM zip: ZIP zinc/iron transport family 51 379 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lal11g1546 379 PANTHER METAL TRANSPORT PROTEIN 34 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1546 Lal-Chr11 18572844 18574684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1546 28 379 Inorganic Solute Cotransporters AT3G12750 58.475 7.15e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1546 K14709 - gmx:100805124 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1546 11 18572844 18574684 Lal11g1546 11 18572844 18574684 ECH
Lal20g0503 20 4298987 4302398 Lal11g1546 11 18572844 18574684 LSH