Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1527 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGCGCTGCATGCAAGCTTCTTAGAAGAAGATGTGCAAAGGATTGTGTGTTTGCTCCTTATTTCCCTGCAAATGAGCCTCATAAGTTTGGCAGTGTTCACAAGGTTTTTGGGGCTAGTAATGTCAACAAAATGCTACAGGAATTACCAGAACACCAACGAAATGATGCGGTTAGTTCGATGGTGTATGAAGCAAATGCAAGGGTGAAGGACCCTGTGTATGGATGCGCAGGAGCAATATCTTCTCTGCAGCAACAGGTTGATGTGCTTCAGACCCAGTTGGCACTAGCACAAGCAGAAATAGTGCACATGAAAATGTACCAATTTTCAGCTTCATCAAATCAGCAGAACCAATCAGTGCCTCATGTAGCATCCAATTCATCATCACAGAATATGTATCAATCAAGCAGGATCCTATCTTCTCAGACCAAGTCCCTTTTTGGCATGGACATGGGGCACTCCTTGTGGTCATGCTAG 513 0.4444 MKEGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPANEPHKFGSVHKVFGASNVNKMLQELPEHQRNDAVSSMVYEANARVKDPVYGCAGAISSLQQQVDVLQTQLALAQAEIVHMKMYQFSASSNQQNQSVPHVASNSSSQNMYQSSRILSSQTKSLFGMDMGHSLWSC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1527 170 Coils Coil 92 112 - -
Lal11g1527 170 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lal11g1527 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 161 - -
Lal11g1527 170 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lal11g1527 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1527 Lal-Chr11 18415461 18418445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1527 1 170 AS2 family AT1G31320 63.842 3.66e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal11g1527 LOB 1.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1527 - - gmx:100803188 252.677