Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1525 ATGGGTGTAAATGAAGATTTCATGAAGGGTGATGAGTATGTAGATGATGATGTTCCACTTCCAGGGTTTAGGTTTCATCCCACTGATGAAGAACTTGTTAGTTTCTATCTTCGTAGGAAGCTTGATGAGAAACCCATCAATATTGAACTTATCAAAGAGATTGATATCTACAAGCATGATCCTTGGGATCTTCCAAAAGCTAGTGGTAATGGAGGAGAGAAGGAAGGGTATTTCTATTGCCAAAGAGGGAGGAAGTATAAGAACAGCATTAGGCCGAATAGGGTTACAGGCTCAGGGTTCTGGAAAGCAACAGGAATAGACAAAGCAGTGTACTCGCGCAGAGGAATAGGAATAGGTAATGACTGCATCGGACTCAAGAAAACACTTGTCTACTACAGTGGCAATGCTGGCAAAGGCACAAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCATCCAATAATGGTACCATCACAACAAAGAATAATGCAGATATTTCCCAAGAAGCTGAAATTTGGACACTATGTAGGATTTTCAAAAGAAATGTGTCACAAAGAAAGCACATGAGATCACATCCAGCTTCTAAGCATCATGACAATATTGACATGAGCAACAGAAAGAACATTAAGGAAGCAGAAGCATATATCAATTTTGGTGCAAGTCTTGGCCATGATCAGAATGAACAGAAGCATGTCAATAATAACTATCCAAAGAATCAGTTTCATGTAGGTCAGTTAAGCTCTCAAGTAACACAAAAACCTCAACTAACTGCATCATCTTCTAACTTATGGACTAACCCTTCTGTGACTAATAACTTCTTCACGTTTGAGAAATGGGATGAGCTTGGATCAATTGTGAAGTTTGCTGTTGATTCACCTACCTTGTAA 888 0.393 MGVNEDFMKGDEYVDDDVPLPGFRFHPTDEELVSFYLRRKLDEKPINIELIKEIDIYKHDPWDLPKASGNGGEKEGYFYCQRGRKYKNSIRPNRVTGSGFWKATGIDKAVYSRRGIGIGNDCIGLKKTLVYYSGNAGKGTKTDWMMHEFRLPSNNGTITTKNNADISQEAEIWTLCRIFKRNVSQRKHMRSHPASKHHDNIDMSNRKNIKEAEAYINFGASLGHDQNEQKHVNNNYPKNQFHVGQLSSQVTQKPQLTASSSNLWTNPSVTNNFFTFEKWDELGSIVKFAVDSPTL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1525 295 Pfam No apical meristem (NAM) protein 21 151 IPR003441 GO:0003677|GO:0006355
Lal11g1525 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 290 - -
Lal11g1525 295 Gene3D NAC domain 28 185 IPR036093 GO:0003677|GO:0006355
Lal11g1525 295 ProSiteProfiles NAC domain profile. 19 181 IPR003441 GO:0003677|GO:0006355
Lal11g1525 295 SUPERFAMILY NAC domain 16 181 IPR036093 GO:0003677|GO:0006355
Lal11g1525 295 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 10 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1525 Lal-Chr11 18396221 18398400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1525 16 232 NAC Transcription Factor Family AT5G39820 48.485 1.51e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1525 NAM 5.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1525 - - lang:109334083 528.48