Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1513 ATGAGCAACATAAGCATGGTAGAGGCAAAGCTTCCACCTGGGTTCAGATTTCATCCTAGAGATGAAGAGCTTGTGTGTGATTATTTGATGAAGAAGGTGACTCATAGTGATTCTTCTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAACAGCATGTGTAGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGATAGAAAATATGCAACTGGGTTACGCACAAATAGGGCAACAGCATCAGGTTATTGGAAAGCCACAGGGAAAGATAGATCAATCAAACTCAAAGGTAGTGTTGTTGGAATGAGAAAAACTTTGGTGTTCTATCAAGGAAGAGCACCTAAAGGGAGAAAAACTGAATGGGTCATGCATGAATTTCGCGTTCAACCTCCTAATATTTCTTCTTCCAAGATAGAAGAAGATTGGGTATTGTGCAGGGTGTTTTATAAAAGCAGAGAAGTTGTTACCAAAGCTAGCATTGGAAGGTGCTATGATGACACAAGATCTTCATCACTTCCTCAATTAGTAGACTCTTACATCACTTTTAATAATAACCAATTCCCTCAAAACCATGCACATCATGAATTTCAGCAAGTGCCCTGCTTCTCCATTTTTTCTCAAAACCAAACCAACCCTCTTAATTTCAACCACCACATAACCACTTTGGACTCAAAATTAGTTGCTAATAACAACCTTAATAATGCAACTACTTATGTAGGAACAACCAATTTGGGTTATTCCTTAGACCCTTTTTCATGTGACAAACAAGTATTAACAGTTGTTTTGAATCAGCTCACAAAGATGGAAAGGAATAACACAACTAACCAATGTCTAAAAGGGTCACCAAGCTTAGCAGAAGGAAGTTCAGAGAGTTACTTATCTGAAGTTGCTATGCCTCAGTTGTGGAACAATTACTGA 936 0.3835 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSSLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSIKLKGSVVGMRKTLVFYQGRAPKGRKTEWVMHEFRVQPPNISSSKIEEDWVLCRVFYKSREVVTKASIGRCYDDTRSSSLPQLVDSYITFNNNQFPQNHAHHEFQQVPCFSIFSQNQTNPLNFNHHITTLDSKLVANNNLNNATTYVGTTNLGYSLDPFSCDKQVLTVVLNQLTKMERNNTTNQCLKGSPSLAEGSSESYLSEVAMPQLWNNY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1513 311 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Lal11g1513 311 SUPERFAMILY NAC domain 2 156 IPR036093 GO:0003677|GO:0006355
Lal11g1513 311 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Lal11g1513 311 ProSiteProfiles NAC domain profile. 11 156 IPR003441 GO:0003677|GO:0006355
Lal11g1513 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 230 - -
Lal11g1513 311 PANTHER OS08G0200600 PROTEIN 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1513 Lal-Chr11 18317509 18323501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1513 2 309 NAC Transcription Factor Family AT1G56010 55.452 4.50e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1513 NAM 6.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1513 - - gmx:100301890 463.381