Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1482 ATGGAGTTCAATTCCAAGAACCTCAAGGATTCACAACCATGGCCATGGACAAAGTGTTTTCACCCCATTAAAGCAAAAGTTACTGCTGCAAAAGTTGCCCAAGAATGGAGTCTCGACCCTTCTAGCCTTATCATTGGAGAAAAGTGTTCTCATGGTGCTCATAGTAATATTTATGAAGGTAAATATAAGGAACACCATGTTGCTATTAAAATCGTTACTATACCAGAAGATGAAGAAAAGGGTTCCTTAGCATCATTATTGGAGACACAGTTCATGAAAGAAGTCACATTTCTACCACGTCTCCACCATCAAAATGTTGTAAAGTTCATAGCTGCATGCAAAGACAACAACAATGCTTATTGTGTTCTCACTGAGTATGTATCAGGAGGTTCATTTAGGTCATATTTGAACAAGTTGAAGTCAAAACCAATGCCCTTAAAGAAGATACTAGGGTTTTCTCTTGATATTGCTCATGGAATGGAATATATACACTCCCAAGGTATCATTCATAGGGATCTTAAACCAGACAATGTCCTTGTTGGTGAGGACTATCACCTTAAAGTTGCAGATTTCGGAATTGCTTGTGATGCTTCGAAGAAGCGTGACTCATGGAGTGGTACATATCGTTGGATGGCGCCTGAGATGATAAAGAAGAAACCATATGGAAGGAAGGTTGATGTGTATAGTTTTGGACTTATGCTATGGGAAATGGTGACTGGAACAGTGCCATATAAGGGCATGACTCCACTTCAGGTTGCATTTGCTGTATCTGACAAGAATTCAAGACCAGAAATTCCTTCAAATTGTCCATATGTTTTTAGAGATTTGATTCAGAAGTGTTGGGATATGAAACCAGAAAAGAGGCCAGAATTCTGGCAGATTGTTCAGGTTTTGGAGAAATTTGATCAGTCTTTAAATGCCATTGATGGAAGAGTATTGAACCTAGTGCATAACCATTGTAGCATAGATCATCATCATAATAATAAGAAAGTTGTGTTTCTTCATTGGATTCAAAATATTGGTCATGTACTTAAGTGCATTCAATAG 1047 0.3801 MEFNSKNLKDSQPWPWTKCFHPIKAKVTAAKVAQEWSLDPSSLIIGEKCSHGAHSNIYEGKYKEHHVAIKIVTIPEDEEKGSLASLLETQFMKEVTFLPRLHHQNVVKFIAACKDNNNAYCVLTEYVSGGSFRSYLNKLKSKPMPLKKILGFSLDIAHGMEYIHSQGIIHRDLKPDNVLVGEDYHLKVADFGIACDASKKRDSWSGTYRWMAPEMIKKKPYGRKVDVYSFGLMLWEMVTGTVPYKGMTPLQVAFAVSDKNSRPEIPSNCPYVFRDLIQKCWDMKPEKRPEFWQIVQVLEKFDQSLNAIDGRVLNLVHNHCSIDHHHNNKKVVFLHWIQNIGHVLKCIQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1482 348 PRINTS Tyrosine kinase catalytic domain signature 124 137 IPR001245 GO:0004672|GO:0006468
Lal11g1482 348 PRINTS Tyrosine kinase catalytic domain signature 162 180 IPR001245 GO:0004672|GO:0006468
Lal11g1482 348 PRINTS Tyrosine kinase catalytic domain signature 206 216 IPR001245 GO:0004672|GO:0006468
Lal11g1482 348 PRINTS Tyrosine kinase catalytic domain signature 225 247 IPR001245 GO:0004672|GO:0006468
Lal11g1482 348 PRINTS Tyrosine kinase catalytic domain signature 269 291 IPR001245 GO:0004672|GO:0006468
Lal11g1482 348 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 318 - -
Lal11g1482 348 Gene3D Transferase(Phosphotransferase) domain 1 129 334 - -
Lal11g1482 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lal11g1482 348 ProSiteProfiles Protein kinase domain profile. 43 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1482 348 SUPERFAMILY Protein kinase-like (PK-like) 16 298 IPR011009 -
Lal11g1482 348 Gene3D Phosphorylase Kinase; domain 1 31 128 - -
Lal11g1482 348 CDD STKc_MAP3K-like 45 298 - -
Lal11g1482 348 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 318 - -
Lal11g1482 348 SMART serkin_6 43 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1482 348 Pfam Protein tyrosine and serine/threonine kinase 45 298 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1482 Lal-Chr11 18065385 18066431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1482 16 343 MAP Kinase Kinase Kinase AT5G58950 52.424 1.89e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal11g1482 PK_Tyr_Ser-Thr 8.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1482 - - gmx:100784454 414.075