Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1475 ATGGTTGGATTCCAGGGTGAGCATATGAATGGGAACATGTATAACAGCAACAATTCTAGTAGTTTTCCAGGTCGTGTGGAACGACTTGTGAGAGGAAGAAAGCTAAGAAAAAACAGCAAGGCATCTCTTTCGAATGAATCTCCAGATAATAACAATAATGACAATAATAATAATGTTATTACCAATGGGGTTACTGAATCTTTGGATCATGAATTGCGCTTAAGAGAAGCTAATAGCTCAACTCATACTTCCCATTTTGAACGGTTCCTGGAAGGTGCAGCAGCAGCAAGGGATTTTACGGATGGATATGAAAGGGAAGATGGGAAACCGTTTAGGCAGCGGCTTTTGGTGGTGGCCAATAGGCTTCCGGTCTCAGCAGTTAGGAAAGGTGAGGATTCATGGTCTTTGGAGATAAGCGCTGGTGGCCTCGTAAGCGCTCTTTTAGGTGTAAAGGAATTTGAGGCCAAGTGGATAGGTTGGGCAGGTGTTAATGTGCCAGATGAGATTGGACAAGAGGCACTTACTAAGGCTTTGGCTGAAAAGAGATGTATCCCAGTATTTCTTGATGAAGAGATAGTTCATCAATATTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGGCTTCCACAAGAAGATCGCCTTGCAACCACACGCAGTTTCCAGTCTCAGTTTGCAGCATATCAGAAAGCAAACCAAATGTTTGCTGATGTTGTAAATGAGCACTATGAAGAGGGTGATGTTGTCTGGTGCCATGATTACCATCTTATGTTTCTGCCACAATGCTTAAAGAATCACAACAGCAAAATGAAAGTTGGCTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAAGACACTGCCATCTCGTTCGGAGCTCCTGCATGCTGTTCTCGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGTGCATGTACTCGGATCCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGGATCAAGGGAAGCTAACTCGTGTTGCTGCATTTCCAATTGGTATAGACTCGGCAAGATTCATACGTGCACTTTACCTTCCTCAAGTCCAGGAGCACATCAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCGTTTGAGAAGTTTCTGGAAGAGAATGCTTATTGGCGTGATAAAGTTGTTCTGCTTCAGATTGCTGTGCCAACAAGAACAGACGTTCCTGAGTATCAAAAGCTCACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGATCACTGACTGCTGTTCCTATACATCACCTAGATCGCTCTCTTGACTTCCATGCTCTATGTGCTTTATATGCTATTACAGACATTGCACTTGTCACATCCTTGAGAGATGGCATGAATCTTGTCAGTTATGAATTTGTGGCATGTCAAGATAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCTCAGTCTCTTGGTGCTGGTGCAATTCTGGTCAACCCTTGGAACATCACTGAAGTTGCTGCTGCAATTGCCAAAGCCCTGAATATGCCATCTGCTGAAAGGGAGAAGCGACATAGGCATAACTTTCATCATGTAAAAACCCACACTGCTCAAGAATGGGCAGAAATTTTTGTAAGTGAGCTAAATGATACCGTTGTTGAGGCACAGTTAAGGACAAAACAAGTTCCACCCCGCCTGCCAACCAAGACTGCAATTGAATGTTATCTGCAATCAACTAATCGGTTGCTTATTTTGGGATTCAATGGAACTTTAACCGAACCTGTTGAGAGAAAAGGTGACCAGTATAAAGAAATGGAACCTACTGTGCATCTGGAACTCAAACAACCGTTGATAGAACTTTGCCGTGACCCAAAGACGACAGTTGTTGTGCTTAGTGGAAGTGGCAGAACGGTTCTAGATGAAAACTTCAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAAGCCTTCTAAAGGAGAATGGATGACAACAATGCCAGAGCAGCTAAATATGGAGTGGGTTGACAGCGTGAAGCCTGTTTTTGAGTATTTCACTGAAAGAACACCTCGGTCGCATTTCGAAGAAAGGGATGCTTCGCTTGTGTGGAATTACAAACATGCAGATGTTGAGTTTGGAAGAGTTCAAGCGAGGGACATGCTGCAACATCTCTGGACGGGTCCAATTTCTAATGCACCTGTTGAAGTTGTTCAAGGGAGCAGATCTGTTGAGGTGCGAGCTGCTGGTGTTACCAAGGGAGCAGGCATTGACCGTATCCTGGGTGAGATAATCCACAATAAATCCATGACAACACCAATCGACTATGTTCTGTGCGTAGGACATTTTCTGACAAAGGATGAAGATATATATGCCTTTTTTGAACCAGAGCTTCCTTCTTCTGGTGTGAGTCTTCCTCGTAATAAGGCAACAGAAGGAGCTAAGTTTACTGCTGAGAGGATATCACCTATGAAGACACCAACACATAAAAATGGTCTAAAGTCATTGCAAAATAAGGCACAACGGCCTCATGCAAATGCTGAGAAGAAACAAACCAATCATATCACTCGACCACCAAAGCGGCCAACTCATGAAAAGACATCTTGGAATGTCCTTGACCTCAAGAAAGAGAATTACTTCTCCTGTGCTGTCGGAAGAACTCAGACAAATGCTCGCTACACACTCGGGTCATCAGATGATGTTGTTTCATTTCTCAAGGAAATGGCAGCTGCATCTTCTAACTCTTCATTCTTAGTATGA 2856 0.43 MVGFQGEHMNGNMYNSNNSSSFPGRVERLVRGRKLRKNSKASLSNESPDNNNNDNNNNVITNGVTESLDHELRLREANSSTHTSHFERFLEGAAAARDFTDGYEREDGKPFRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFEAKWIGWAGVNVPDEIGQEALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKNHNSKMKVGWFLHTPFPSSEIHKTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSARFIRALYLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAITDIALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSAEREKRHRHNFHHVKTHTAQEWAEIFVSELNDTVVEAQLRTKQVPPRLPTKTAIECYLQSTNRLLILGFNGTLTEPVERKGDQYKEMEPTVHLELKQPLIELCRDPKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLKPSKGEWMTTMPEQLNMEWVDSVKPVFEYFTERTPRSHFEERDASLVWNYKHADVEFGRVQARDMLQHLWTGPISNAPVEVVQGSRSVEVRAAGVTKGAGIDRILGEIIHNKSMTTPIDYVLCVGHFLTKDEDIYAFFEPELPSSGVSLPRNKATEGAKFTAERISPMKTPTHKNGLKSLQNKAQRPHANAEKKQTNHITRPPKRPTHEKTSWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVSFLKEMAAASSNSSFLV 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1475 951 Gene3D Glycogen Phosphorylase B; 106 360 - -
Lal11g1475 951 SUPERFAMILY HAD-like 611 941 IPR036412 -
Lal11g1475 951 CDD HAD_TPP 612 829 - -
Lal11g1475 951 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 941 - -
Lal11g1475 951 MobiDBLite consensus disorder prediction 9 24 - -
Lal11g1475 951 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 941 IPR001830 GO:0003824|GO:0005992
Lal11g1475 951 Gene3D Glycogen Phosphorylase B; 361 564 - -
Lal11g1475 951 Gene3D - 614 825 IPR023214 -
Lal11g1475 951 TIGRFAM T6PP: trehalose-phosphatase 610 837 IPR003337 GO:0003824|GO:0005992
Lal11g1475 951 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 114 579 IPR012766 GO:0003825|GO:0005992
Lal11g1475 951 Pfam Trehalose-phosphatase 617 852 IPR003337 GO:0003824|GO:0005992
Lal11g1475 951 Pfam Glycosyltransferase family 20 114 579 IPR001830 GO:0003824|GO:0005992
Lal11g1475 951 MobiDBLite consensus disorder prediction 875 899 - -
Lal11g1475 951 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 582 - -
Lal11g1475 951 MobiDBLite consensus disorder prediction 41 61 - -
Lal11g1475 951 Gene3D - 701 781 - -
Lal11g1475 951 CDD GT20_TPS 114 579 IPR001830 GO:0003824|GO:0005992
Lal11g1475 951 MobiDBLite consensus disorder prediction 873 899 - -
Lal11g1475 951 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1475 Lal-Chr11 18006606 18025740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1475 9 946 Trehalose Biosynthesis Gene Families AT1G78580 75.209 0.0 1451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1475 K16055 - gmx:100789554 1567.75