Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1468 ATGAAAAATTCAACCCGGCCCAAATGGGTTGGACCGGCCCAGATTATTATCCATTCTGAACCGGTTATAGAGAAGAGGGTCACTCTCTTCAACCCTTTCAATAGTGTTGTAGAGAGAGAAGAAGAAAAAATGGCAGGAGTGGGACCCATATCACAGGACTGGGAGCCGGTGGTGATAAGGAAGAAGGCACCGAACGCTGCGGCGAAGAAAGATGAGAAGGCTGTGAACGCTGCTCGTCGTTCCGGCGCTGAGATTGAAACTGTCAAAAAATCAACTGCTGGGACAAATAGAGCTGCCTCTAGCAGCACTACTTTGAACACAAGGAAGCTTGATGAAGAAACTGAGAATCTTCACCATGAAAGGGTACCAACTGAATTGAAGAAAGCCATAATGCAGGCTAGGCTGGAGAAAAAACTCACTCAGGCTCAGCTGGCTCAGGTGATTAATGAAAAGCCTCAGATTATACAGGAATATGAATCTGGAAAGGCCATTCCAAATCAACAAATAATCGGTAAACTGGAGAGAGCTCTTGGTGCGAAACTGCGTGGAAAGAAATGA 558 0.4588 MKNSTRPKWVGPAQIIIHSEPVIEKRVTLFNPFNSVVEREEEKMAGVGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETVKKSTAGTNRAASSSTTLNTRKLDEETENLHHERVPTELKKAIMQARLEKKLTQAQLAQVINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1468 185 Pfam Multiprotein bridging factor 1 52 122 IPR013729 -
Lal11g1468 185 Coils Coil 130 150 - -
Lal11g1468 185 Gene3D - 114 185 IPR010982 GO:0003677
Lal11g1468 185 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 44 185 - -
Lal11g1468 185 MobiDBLite consensus disorder prediction 88 107 - -
Lal11g1468 185 ProSiteProfiles Cro/C1-type HTH domain profile. 130 184 IPR001387 -
Lal11g1468 185 MobiDBLite consensus disorder prediction 70 118 - -
Lal11g1468 185 MobiDBLite consensus disorder prediction 70 86 - -
Lal11g1468 185 CDD HTH_XRE 128 178 IPR001387 -
Lal11g1468 185 Pfam Helix-turn-helix 130 180 IPR001387 -
Lal11g1468 185 SMART mbf_short4 129 184 IPR001387 -
Lal11g1468 185 SUPERFAMILY lambda repressor-like DNA-binding domains 124 181 IPR010982 GO:0003677
Lal11g1468 185 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 44 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1468 Lal-Chr11 17960919 17962909 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lal11g1468 MBF1 5.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1468 K03627 - qsu:112033276 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1468 11 17960919 17962909 Lal11g1468 11 17960919 17962909 ECH