Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1452 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGTCTTATTTTCATCACAAAAGGGCATCCTCAACCGCAACTGTAACCACAACCACTACTCCTCAAAGCACTTCTCCTCAACAACAACATAATTTGGCATCATGGGTTGATGAGTTCCTCGACTTCTCGTCATCACGGCGAGGAGCTCATCGGCGCTCAGCCAGCGACTCAATTGCATTTCTTGAGACGTCGTTCGACAGATTGGACGAGGAGCAGCTGATTTCGATGTTTTCCGATGATTTCACTGCCGTTGCTGTTCCACCGCCGCAGACTTCTTCCACGTCAAACCCATCGTCACCGTGCTCCGACCAGAATAGTAATAATGATGAGAAGCCAATGGGAATGGCGTTGGACGTTGTGAATCATGAAGTGAAGCCTAAGAATGAAATGGTTGAAGAGGAAAGCTCATTCAAGTATGATGCGGCGGCGCAGCCACCCTCTGCCGCCACTACCGGCTGCAGTGAAACCGTGTGTGATCCCAAAAGGGTCAGAAGAATTTTGGCTAACCGGCAATCAGCTCAAAGGTCAAGGGTGAGAAAGTTACAATACATTTCTGAGCTTGAAAGGAGTGTCACAAGTTTGCAGAGTGAGGTATCAGCATTGTCACCACGAGTTGCATTCTTGGACCACCAACGTTTGATTCTTAATGTCGACAACAGTGCCTTGAAGCAAAGGATTGCAGCTTTGGCCCAAGATCATATTTTCAAACATGCTCATCAAGAAGCATTAAAGAAAGAAATAGAAAGACTGAGACAAATCTATAATCACCAACAGAACCTACAGAAGATGGGTAACTCAATCAACAACAATGGCCATGGTCCTCAACTACAACCACAAATGCAACCTCATCATTCTCTCCATCATCATCAACAACAACAACCATTGGCATGCATGGACAAAGAGCAGCTCCTAAGTTGA 960 0.4573 MAQLPPKIPTIPQNWSYFHHKRASSTATVTTTTTPQSTSPQQQHNLASWVDEFLDFSSSRRGAHRRSASDSIAFLETSFDRLDEEQLISMFSDDFTAVAVPPPQTSSTSNPSSPCSDQNSNNDEKPMGMALDVVNHEVKPKNEMVEEESSFKYDAAAQPPSAATTGCSETVCDPKRVRRILANRQSAQRSRVRKLQYISELERSVTSLQSEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDHIFKHAHQEALKKEIERLRQIYNHQQNLQKMGNSINNNGHGPQLQPQMQPHHSLHHHQQQQPLACMDKEQLLS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1452 319 Coils Coil 254 274 - -
Lal11g1452 319 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Lal11g1452 319 Pfam bZIP transcription factor 175 220 IPR004827 GO:0003700|GO:0006355
Lal11g1452 319 MobiDBLite consensus disorder prediction 99 125 - -
Lal11g1452 319 MobiDBLite consensus disorder prediction 276 313 - -
Lal11g1452 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Lal11g1452 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 225 IPR004827 GO:0003700|GO:0006355
Lal11g1452 319 Gene3D - 174 226 - -
Lal11g1452 319 PANTHER BASIC LEUCINE ZIPPER 34 1 295 - -
Lal11g1452 319 MobiDBLite consensus disorder prediction 276 312 - -
Lal11g1452 319 PANTHER BASIC LEUCINE ZIPPER 2 1 295 - -
Lal11g1452 319 SUPERFAMILY Leucine zipper domain 175 229 IPR046347 GO:0003700|GO:0006355
Lal11g1452 319 MobiDBLite consensus disorder prediction 98 127 - -
Lal11g1452 319 CDD bZIP_plant_RF2 176 226 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1452 Lal-Chr11 17852772 17855462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1452 1 253 bZIP Transcription Factor Family AT3G58120 52.249 2.50e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal11g1452 bZIP_1 2.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1452 - - gmx:100820197 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1452 11 17852772 17855462 Lal11g1452 11 17852772 17855462 ECH
Lal20g0357 20 2872892 2877038 Lal11g1452 11 17852772 17855462 LSH