Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1450 ATGGGCGGCGAGCTCATGAAGAAGAAACCGAAGCCAACCCAAATGAACCCAAACTGGGTTCAACTTCAACAAAAGCTGAATCTGAATTCTAAACCTTATTCAAGGACCTTCAAAAAATTAGAAGAAGATGACACCTCTAAATCAATATTGGGGAAACGTAAGGACAGGTCAGATGATGAATCCGATGACTCTGAGATTAATCCTCTTGTTCCTGTAAATGATGATTCAAGTCTGACGGATGCAGTGGCTATGGATTGTGAAATGGTTGGTGTTGGTGAAGGAAACAAAAGTGCCCTTGGAAGAGTAACAATTATTAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTTCGGCCACTGGAGCGGGTTGTTGACTTTCGCACCTTCGTTAGTGGCATAAGACCTCGGGATTTGAGAAAAGCGAAGGATTTGTGGTCTGCTCAGAAGAAAGTGGCAGAGTTGATCAAAGGAAGGATCCTTGTAGGTCATGCCTTGCATAATGATCTTAAGGCGTTATTATTAAGTCATCCGAAAAAGGATATACGGGATACCTCCGAGTACCAACCATTTCTAAAGTCAGGTAGCAGAAGAGCGCTGAAGCATCTTGCCGAGGAAATTCTTGGTGCTAAGATACAATCGGGAGAGCACTGCCCTGTAGAAGATGCTCGCGCGGCCATGATGCTTTACCAAAGAAATAGAAAAGAGTGGGAGAAGAGCATAAAAGATCAGGTTCGGAACAAAAAGAAGCAAGGGAAACGGAAGCCGAAAAAGAAGCCAAAGAATGAAGATGCTTCAAATGTTAGCCAAGATGGATATGAATCATTGTAG 828 0.4263 MGGELMKKKPKPTQMNPNWVQLQQKLNLNSKPYSRTFKKLEEDDTSKSILGKRKDRSDDESDDSEINPLVPVNDDSSLTDAVAMDCEMVGVGEGNKSALGRVTIINKWGNVIYDEFVRPLERVVDFRTFVSGIRPRDLRKAKDLWSAQKKVAELIKGRILVGHALHNDLKALLLSHPKKDIRDTSEYQPFLKSGSRRALKHLAEEILGAKIQSGEHCPVEDARAAMMLYQRNRKEWEKSIKDQVRNKKKQGKRKPKKKPKNEDASNVSQDGYESL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1450 275 MobiDBLite consensus disorder prediction 37 71 - -
Lal11g1450 275 SMART exoiiiendus 80 238 IPR013520 -
Lal11g1450 275 PANTHER RNA EXONUCLEASE 4 26 257 - -
Lal11g1450 275 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 26 257 - -
Lal11g1450 275 MobiDBLite consensus disorder prediction 236 275 - -
Lal11g1450 275 Gene3D - 77 256 IPR036397 GO:0003676
Lal11g1450 275 MobiDBLite consensus disorder prediction 37 63 - -
Lal11g1450 275 Coils Coil 219 239 - -
Lal11g1450 275 CDD REX4_like 82 230 IPR037431 GO:0006364|GO:0008408
Lal11g1450 275 Pfam Exonuclease 82 229 IPR013520 -
Lal11g1450 275 SUPERFAMILY Ribonuclease H-like 81 235 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1450 81 235 C2H2 Transcription Factor Family AT5G40310 39.181 2.31e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1450 K18327 - gmx:100819122 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1450 11 17828982 17832575 Lal11g1450 11 17828982 17832575 ECH