Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1445 ATGCGATCCGGTTCGTTGTTGGAGGATAGCAACACTGTTCGATCGTTGCGGCTTCGAAAGAAGCACAAAAGGTTGGATGCAATATACGAGGAGGAGTGCAATCGGAACCATGGTGAGTTCAATGAGGATGATGATATTGATAATGATAATGATGATGATGCTTTGAATCACGATGCAGGAGTTCGCCGCAGTTCCCGCGTTCGGCGTGCCCCTGTTTTGCTAGATGCTTCTCCTCCTCCACCGAGGAAACGGCGGAGGATAGGGGAGAGTGGAATGCAGAGGGGTGTTGAGAGTGTCAAGAGTTTAGAGAGGGAAAATGGGAGTTCCAGCGTTGGGGCGGAGAGTCCTGGGACTTGGAATTCGAGGTTGAGATCGAGGGTTAGGAATGCAGGTGTTGAGGTGAAGGAGAAGAGGGAATCTAGGGTTAGGAATGTAGGTTTTGAGGCAGAGAGGGAGAGGGAATCACACCGTGGGAAAAGGAAGCTTTTTGAGGATGTGGTTGGAAGTGTGGGTGATGAGGAGCTGAAGGTTGTACAGGTAGATGACAACGAGGATTTGGATGATGTAGAGGTAAATAACAAAGAGGAACGGGAAGGTTCCATAACAGAGATAGTTAAGTCAAAGAAACTGGGGAGGATCGATGTCACAAAGATTGAGTCTCGTGGCAGTTTAGATGTGAGTAAGAGTCAAGAAATGGAGCTTGTATTGGATAAAGATAATGATGAGGAGAGTGCTTCAATTCCAGAAAACAAGTTGTTGGGAGCGAAAGACATTTTGGATGGAGATGCCCCTCCACTGTTAGAGAATGAGGAGAGAAATTTATCTAACAATTTTCAGACAGAGGAGTGTTGTGGGGGCATTGAACCATCTCTGGTGGAATGTGGCGATAAACCGGATGATCAGTTAGAGAGTTTGAAGGAAGGGCAAAATGCTAGTGGTGTAGCTGAAATTGTGCCAAAACATGTAGAAATTGAAGGATCTGTTGATAAGGAGGTTGACATTGATAGAAATGACTTGAAAGATGCAAATGTTGCAAGGATGGGCGAGTTGAAACAAGCTTCAAATGACGAGCCTGGTCTCCGACGTATCAAAGAGGGTAGACGATGTGGTTTGTGTGGTGGAGGGACTGATGGTAAGCCTCCAAAAAGGTTAGCTCATGATAATGGTGAGAGTGAGAATGAAGCATATAGCGGCTCTTCCGCTTCAGAGGAGCCTAATTATGATGTCTGGGATGGTTTCGGTGATGAACCTGGCTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCGCGATGGTATTGCTAGAATCTGGGTGCATCAGCTCTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGTTGCTTAAAAAATGTGAGAGCTGCACTTTTCCGAGGAAGAGCATTGAAGTGTAGCAGTTGTGGGAGGCGAGGAGCGACTACTGGTTGTCGCGTCGACCGTTGTCCAAAAACTTATCACTTGTCTTGTGCAAGAGCAAATGGGTGCATCTTTGATCATCGTAAATTTCTTATAGCCTGCACAGACCATCGACATCTCTTCCAACCCCGTGGTAGTAAATATCTAGTCCACATGAGGGCTAAGAAAATGAAGTGGGAGATGAAAAAGCGTTCAAATGATGCCTTGAGAAAGGATATTGGCGAAGAAGAGAGATGGTTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGAGAGAGCAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTTTACATTGGAGATTCAGACTCCGCCCCTGAGAAATCATTTCAGGGATGGGAATCTATTGCTGGGCTTAAAGAAGTCATCCGCTGTATGAAAGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCCCCGAGAGGTGTTCTTCTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTTCGAGCATTGATAGGTGCATGTGCTCGTGGCAATAAACGGATTGCTTATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTGGGAGATGCTGAGCGCCAACTAAGACTGTTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATTGATGGACTTGCACCCTGTCGTACTAGGCATCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGATCAGTGGTAGTCATAGGGGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTCAGGCGGCCTGGAAGGTTTGATAGGGAAATTTATTTTCCATTGCCATCAGTCGAGGACAGAGCTTCGATTCTCTCAGTTCACACCCAGAGGTGGCCAAAACCAATTAGTGGATCGTTGCATGAGTGGATTGCAAGAAAAACTCTAGGCTATGCTGGTGCAGATCTCCAGGCTCTCTGTACTCAAGCAGCCATCAATGCTTTGAAAAGGAATTTCCCTTTGCATGAAGTGCTGTCTGCAGCTGAAGAAAAACATGCTAGTTGCAAACACCTTCCTCTTCCATTCTTTGCAGTGGAGGAGAGAGATTGGCTAGAGGCTTTTCTATGTTCCCCACTACCGTGCTCCCGGAGAGAAGCCGGAAATGCTGCTAATGATGTAGTATGCTCCCCTCTTCCCATCCACCTCATTCCTTGTCTAATGCGGCCACTGTGCACTCTTCTCGTATCTCTTTATCTTGATGAACGTCTATGGTTGCCACCTCCTATATCTAAAGCTGTAACAATGATTAAGGCCGTAATTATTTCTGCTCTGGACAAAAAGAAAATGTCTACTCATCAGTGGTGGTTGTATGTTGATGATTTTCTTCAAGAAACACAAATTGCTTGGGAGGCAAAGAGGAAGCTTGCTTGTTCTGGCATTTTATCTGTGAACAATTGCTTTACTGATTCTCATGATACTGTGGATGATACTGACGATGGTGAGGTGAAGGTTGAACCCTCCATGGAGAACAATTTTAACATGCGTAAATGTTTATTGCCAAACATGTCATTTGGATTGACTAACCAATCAGGATTTCGGATACTGATTTCTGGAAATACGCGATCTGGGCAGAGACATCTTACTTCTTGCCTTCTTTACTGCTTTAATGAGAGTCTTGAAATACAGAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATGTAGTGCAAGGGATTGCACAAATATTAATGAAATGTGCCAGTTTGAAGTCATGCATAGTATTCATGCCAAGAATTGATCTGTGGGCTGTGGAGAAACATTTCCAAATTGATGAAAGGACTGGTTCTTGCTCAACAACTCGTCTATTACCCAGGAAGGAAAAATCTTGTTTCACATCAAGCCAGGATGAGAAGGAAAACAAGTTAAATACTAAGAAAAACTCAGAAAATGTGACCAATGGTGAAGCCGACATTAAGGCATCACATGCCTGGTTGTCATTTATTCAGCAGGTGGAGTTTATTGGTGTATCCACATCCTTGATGATTCTGGCTAGTTCAGAAATTCCCTATGCAGAATTTCCATGTAACATCAAGGAATTCTTTCAGGCTTATCAATCTAATGACAGCCAATCAATTCCTTTGGTGCAGACAGTTCCTCGATTCTCTCTGCAGGTTGATGGGAATTTTGATCATGACATGGTGATCAATGTATCTGCAGCAGAGGTATTGAGAAATTTAGTTGAGCAGCAGGTTCAACTGATTCATAAGAAATCTCATGCTCATATAGGTGTTATAAAGGGCTATGGAGCCTATGATTCAATTGAAATTTGTAAAGACAAGGTATGTAAGAGAAAAGATAATGGCTCAACTAATGAAAAACAGAGTCAAATCCAACTTCCAGAGTCCCTTACAAAAGTTCCACCACCATCTAACAATAGGTCGTTGAAGGGAAAATCAACCCTTTTGTCGGCAATATCCACATTTGGCTATCAAATTCTTTTATACCCACATTTTGCTGAACTTTGTTGGGTTACATCAAATTTCAAAGAAGGTCCCTGTGCTGACGTGAATGGACCTTGGAGGGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAACAATTCACAAGACCAGGTGGTTGATTCCTCTAGCTCTGGTGGCATCAAAAACAAAGAAAGATCCGGTATAGTCAGAGGTTTGACTGCTGTTGGTTTATCAGCATATAGAGGTGTTTATAAATCGGTGAGGGAAGTTTCTCTTAATGTAAGGAAGGTTCTTGAGATCTTAATCGAACATATCAATGCAAAAATTCAAGCAGGGAAAGACAGACATCAATATCTTCGTATTTTGTCACAAGTGGCTTACTTGGAAGATATGGTCAACAACTGGGCTTATGCATTGCTGAGTCTGGAGCAGGATTCCCCCGAGCTTGTGCAAAAGGTTACACCAGCAACTGTTGGGTCATTAAATAGTCATCTCACATGTGAAGATCACCAAACTGAAGCTGAGCATTGTCATTTGGTTGTTCCTAAGAATGGTGATGATTTGAAGGCACTGGAGAGAAGTCATAAGGGAATTGCGGCTGAAATGACTGGCTCTATTGCCTTGAATGGAAAAAATGATAATTTAGATAATCTCGATCACAATGGTCGAAATGCAAGTTCTGAAGGATCTCTACAGAGCCATTATTTATCAGATAAGCATATTAACAACTCTGCTTCTTCCAACCAACCTGTTAATCCATCCATAAATCAAGAGAGTAGGTTACCATTTGGACTATCTGAACCAGTAACTGTCTGTGAGCAAGAGGGTGTTGAGATAGGTAACTGCAACACAATCTCTAATCAGCCTCTCAGCTCGTCCTCGTTAGAGACTGGTGTGAAATTAAGTGATGGCAGTGATCATGGTAAAGGTGACAATGTTATTGATATTAACGCCGCTTCAAGTGAGGCCAGTGATCATGCTAAATCTGGGGTTATTTGCTTATATCAATGTTGCCATGGATGTATCTCCAGTCTCTATCATTTGACACAGAAACTACTTCTTCGTGAGTATCGGCTGAATAACAGCCATTGGACGGTGGAAGATGTACATGATGCAGTTGCATCATTATCTGTGGATCTTATTTCAGCACTGAGAAAATGCTATTTAGCTGAAGATTTAAGTGATTCATCTAACAAAACCTCAAGACATGAAAAGCATGGAAGAACATGCAATCCCTTAAACCAAGGCAAAGATGTTGTGCCAGCTGAATGTTTTTCTCATTCAACAATGCAAGATGCAACTGGAGGCAAAGATGAGGCACTGAAGCTTGATTTGAAATTTATTTTCAAAGATGGTGTACTAATGCACATGGACCCAGACAAAGATGTCCCACTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTGTAAGGGAGTTGATAGAAATGATGAAGCAACCTTTTGATTAA 5442 0.427 MRSGSLLEDSNTVRSLRLRKKHKRLDAIYEEECNRNHGEFNEDDDIDNDNDDDALNHDAGVRRSSRVRRAPVLLDASPPPPRKRRRIGESGMQRGVESVKSLERENGSSSVGAESPGTWNSRLRSRVRNAGVEVKEKRESRVRNVGFEAERERESHRGKRKLFEDVVGSVGDEELKVVQVDDNEDLDDVEVNNKEEREGSITEIVKSKKLGRIDVTKIESRGSLDVSKSQEMELVLDKDNDEESASIPENKLLGAKDILDGDAPPLLENEERNLSNNFQTEECCGGIEPSLVECGDKPDDQLESLKEGQNASGVAEIVPKHVEIEGSVDKEVDIDRNDLKDANVARMGELKQASNDEPGLRRIKEGRRCGLCGGGTDGKPPKRLAHDNGESENEAYSGSSASEEPNYDVWDGFGDEPGWLGRLLGPINDRDGIARIWVHQLCAVWSPEVYFAGLGCLKNVRAALFRGRALKCSSCGRRGATTGCRVDRCPKTYHLSCARANGCIFDHRKFLIACTDHRHLFQPRGSKYLVHMRAKKMKWEMKKRSNDALRKDIGEEERWLENCGEDEEFLKRESKRLHRDLLRIAPVYIGDSDSAPEKSFQGWESIAGLKEVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGNKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRHQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSVEDRASILSVHTQRWPKPISGSLHEWIARKTLGYAGADLQALCTQAAINALKRNFPLHEVLSAAEEKHASCKHLPLPFFAVEERDWLEAFLCSPLPCSRREAGNAANDVVCSPLPIHLIPCLMRPLCTLLVSLYLDERLWLPPPISKAVTMIKAVIISALDKKKMSTHQWWLYVDDFLQETQIAWEAKRKLACSGILSVNNCFTDSHDTVDDTDDGEVKVEPSMENNFNMRKCLLPNMSFGLTNQSGFRILISGNTRSGQRHLTSCLLYCFNESLEIQKIDMATISQEGHGDVVQGIAQILMKCASLKSCIVFMPRIDLWAVEKHFQIDERTGSCSTTRLLPRKEKSCFTSSQDEKENKLNTKKNSENVTNGEADIKASHAWLSFIQQVEFIGVSTSLMILASSEIPYAEFPCNIKEFFQAYQSNDSQSIPLVQTVPRFSLQVDGNFDHDMVINVSAAEVLRNLVEQQVQLIHKKSHAHIGVIKGYGAYDSIEICKDKVCKRKDNGSTNEKQSQIQLPESLTKVPPPSNNRSLKGKSTLLSAISTFGYQILLYPHFAELCWVTSNFKEGPCADVNGPWRGWPFNSCIIRPNNSQDQVVDSSSSGGIKNKERSGIVRGLTAVGLSAYRGVYKSVREVSLNVRKVLEILIEHINAKIQAGKDRHQYLRILSQVAYLEDMVNNWAYALLSLEQDSPELVQKVTPATVGSLNSHLTCEDHQTEAEHCHLVVPKNGDDLKALERSHKGIAAEMTGSIALNGKNDNLDNLDHNGRNASSEGSLQSHYLSDKHINNSASSNQPVNPSINQESRLPFGLSEPVTVCEQEGVEIGNCNTISNQPLSSSSLETGVKLSDGSDHGKGDNVIDINAASSEASDHAKSGVICLYQCCHGCISSLYHLTQKLLLREYRLNNSHWTVEDVHDAVASLSVDLISALRKCYLAEDLSDSSNKTSRHEKHGRTCNPLNQGKDVVPAECFSHSTMQDATGGKDEALKLDLKFIFKDGVLMHMDPDKDVPLHCKFENLCLCSVRELIEMMKQPFD 1813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1445 1813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 416 520 IPR013083 -
Lal11g1445 1813 ProSitePatterns AAA-protein family signature. 746 764 IPR003960 GO:0005524|GO:0016887
Lal11g1445 1813 Gene3D - 602 776 IPR027417 -
Lal11g1445 1813 Pfam ATPase family associated with various cellular activities (AAA) 641 776 IPR003959 GO:0005524|GO:0016887
Lal11g1445 1813 Gene3D - 777 837 - -
Lal11g1445 1813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 835 IPR027417 -
Lal11g1445 1813 ProSiteProfiles Extended PHD (ePHD) domain profile. 398 518 IPR034732 -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 1287 1310 - -
Lal11g1445 1813 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1809 - -
Lal11g1445 1813 SMART AAA_5 637 778 IPR003593 -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 372 407 - -
Lal11g1445 1813 Pfam AAA+ lid domain 803 834 IPR041569 -
Lal11g1445 1813 PANTHER AAA DOMAIN-CONTAINING 58 1809 IPR045199 -
Lal11g1445 1813 CDD AAA 635 776 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 1281 1310 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 23 42 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 102 118 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 53 69 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 1 118 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 1564 1584 - -
Lal11g1445 1813 Pfam PHD-like zinc-binding domain 439 518 - -
Lal11g1445 1813 MobiDBLite consensus disorder prediction 1538 1557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1445 Lal-Chr11 17804750 17812571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1445 603 838 Calmodulin-binding Proteins AT3G56690 41.597 1.66e-45 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1445 11 17804750 17812571 Lal11g1445 11 17804750 17812571 ECH
Lal20g0349 20 2809173 2816751 Lal11g1445 11 17804750 17812571 LSH