Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1442 ATGGACAACTACTACAACCACAATCACTTTGATAACAACAGTGATGCTCTCTTACCACCTGGATTTCGTTTTCACCCCACAGATGAGGAGCTTATCACTTATTACCTTGTCAAGAAGGTCCTAAACAACACCTTCAATGGAAGAGCCATAGCTGATGTTGACCTCAACAAGTGTGAACCATGGGAGCTCCCTGATAAAGCTAAGATGGGTGAAAAGGAGTGGTATTTTTTCAGCTTACGTGATAGAAAGTACCCAACTGGGCTACGTACAAATAGGGCTACAAAAGCTGGGTATTGGAAAGCCACTGGTAAAGATAGAGAGATTTATAGTTCAAAAACTCATTGCCTTGTTGGAATGAAGAAAACTTTAGTTTTCTATGGAGGTAGAGCTCCCAAAGGTGAGAAAAGTAACTGGATCATGCATGAGTATAGACTTTATGGCAAACTTGCTTATCATTATCTCTCTCACAGCTCCAAGGACGAGTGGGTCATATCTCGTGTGTTTCAGAAGAGCACCACCGGTAGTGGTGGCTCCACCGTGTCTGCCACCACCAGCAACTCTTCCAAGAAAACAATACCCATTACCACCACCACCACCTCATCTGTTAACATGAGCCTCTGTCTTGAACAACCAAGTTCTCCCTCTTCAGTTTACCTTCCACCTTTTCTACACTCTTCTCCCTACACCACCACCGCTACCACCGCCGCCGCCGCCTTCAGCAACACCATAATAGAGCACGTGTCCTGTTTCTCCAACAACAACTTCAATAATGAGAGCTTTGGATTTGCTCCTCAGCCTCTCACTCTAGACCCTTTTGCTCGGTTCCAAAGAAGCTTTCAGCCGCCTTTCTTTTACTCCCCGGCGGTGCAGCCCGTCAATGACGGTGATTTTATCGCGCCGGTGGAGAAAAAGGTGGCTGATGGTGGTTCCAACATTCCATTAGGACCACCAGAGTTTGATTGCATGTGGGGCTATTGA 978 0.4611 MDNYYNHNHFDNNSDALLPPGFRFHPTDEELITYYLVKKVLNNTFNGRAIADVDLNKCEPWELPDKAKMGEKEWYFFSLRDRKYPTGLRTNRATKAGYWKATGKDREIYSSKTHCLVGMKKTLVFYGGRAPKGEKSNWIMHEYRLYGKLAYHYLSHSSKDEWVISRVFQKSTTGSGGSTVSATTSNSSKKTIPITTTTTSSVNMSLCLEQPSSPSSVYLPPFLHSSPYTTTATTAAAAFSNTIIEHVSCFSNNNFNNESFGFAPQPLTLDPFARFQRSFQPPFFYSPAVQPVNDGDFIAPVEKKVADGGSNIPLGPPEFDCMWGY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1442 325 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Lal11g1442 325 SUPERFAMILY NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
Lal11g1442 325 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
Lal11g1442 325 ProSiteProfiles NAC domain profile. 18 170 IPR003441 GO:0003677|GO:0006355
Lal11g1442 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 252 - -
Lal11g1442 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 12 252 - -
Lal11g1442 325 MobiDBLite consensus disorder prediction 171 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1442 Lal-Chr11 17781011 17783974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1442 9 283 NAC Transcription Factor Family AT5G53950 55.414 1.03e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1442 NAM 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1442 - - cam:101501114 399.438