Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1441 ATGACTGATTTAGCGGGTCTAGCCGAGGCAGCAGGGTCAAGATTCACTTCATTGGAGCTTATCGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAGTCTGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTTTCACAATGTCGATCTCAATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCAGATCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGATTTGCTGCATGCCATTGATTACCTACACAGTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATCTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTATCAAGGACTATATCGAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGTCATTGAGATGGCCAAAGGGGAGCCTCCACTTGCTGATCTCCACCCCATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCACCGCAGCTAGATGAGCATTTTTCTCGTCCCTTGAAAGAATTTGTTTCATTGTGTTTGAAGAAGGTTCCTGCTGAGGCAAGTGCATCTAGGCCAAGTGCTAAGGAACTTCTTAAACACCGCTTCATTCGGAATGCTAGGAAGAGTCCAAAGCTTCCTGAAAGAATAAGCATGTTTTTCATGACCATAAAATTGAAAATTACAAATACTACTCACCAGCTTGTGGTTAACACCACCATTGCCTTGTGGTTTCATGATAGGGAGCGTCCTAAGTACCAAATAAAGGAAGATCAAGAGACACCTAAAAATGGTCGGAGAGGGATGGGGGAAGCCTCTGATACTATGAAGGTGGGAAGAGATTCAAGAGGTGAAGAAACTAATCGACCCAGTGATCAGGGTAAAACCATGAAAAGTTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGAACTGGAACCTTTCGTAGTGTTGCACGACCACCTCAATTTAGAGATAAGAAAACTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCTCCAGACAGTGGCTATCAAAGGGGGTCTGACGATAGAAGTGCACTTAATGAATCACTTGAAAGTTCCTTTGGAAAAGATCCTAAAGTTTCCTACCATGATGAGCATCTGGCTAATCTTGAAGATGATGAATATTCTGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGTCATCGGGGCTTCGTGACCAGAGCTCTCAGTCTAGCAGCAGCTATACTTCTTTTGAAGATACTTCTACCACTGGAACTGTTGTTTTTCGTAACCAGCGTGATGATTCTGGTTCTCCAGAGACATCAAGTTCCCGAGACGGACTTCATGACAGAAATTCAAATACCTCATTGGAAGACAGTGCTGCAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGAGGACTAAGGAAAGGCAATGTTCGTGAGAGATTTGCACTGGGGAAAAATAACAATCAACAAGAAAGCAAGAGAGAAATGATGAATAGCTCTGGTTCTTCGAGATCATCATCACGAAAGGGCATGCCAAGATCACATTATTCTAGTGGTGATGAAGAAAGTGCTAAAATAATGTCGTCCTCTGTGCCGTTATCAGTTTTGCTTATTCCTTCACTAAGAGAGGCCATTGCTCATGTCGTGTTCAATATACAGGCCATTGTTGATGATCCAGAAGGGTCAATCATAGGAGCAGTTATCAATTCTCTCATAAACATGGAGAGCATAAAGCCTCGATCCTCCGATGTTCTTGTCAAAAAGTTGCTTCAACGGTTGGCAAGTTCAAAGGATGATTCATTGAAAGACCTTCAGGAATTGGCAGGCCAACTATTCAGCAAGACCAAGTCAGGTGATGCAGACTCTGATGGCATCAGGAAACAGAATAAGGAACTTCATCCAAATAGCAACTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCCATCTTGA 2193 0.4236 MTDLAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSQYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLSRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITVIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAEASASRPSAKELLKHRFIRNARKSPKLPERISMFFMTIKLKITNTTHQLVVNTTIALWFHDRERPKYQIKEDQETPKNGRRGMGEASDTMKVGRDSRGEETNRPSDQGKTMKSSGWDFSIGGSQGTGTFRSVARPPQFRDKKTEVSHNQLTQRKAPDSGYQRGSDDRSALNESLESSFGKDPKVSYHDEHLANLEDDEYSGSGTVVIRSPKGSRSSGLRDQSSQSSSSYTSFEDTSTTGTVVFRNQRDDSGSPETSSSRDGLHDRNSNTSLEDSAANLAEAKAAIQGGLRKGNVRERFALGKNNNQQESKREMMNSSGSSRSSSRKGMPRSHYSSGDEESAKIMSSSVPLSVLLIPSLREAIAHVVFNIQAIVDDPEGSIIGAVINSLINMESIKPRSSDVLVKKLLQRLASSKDDSLKDLQELAGQLFSKTKSGDADSDGIRKQNKELHPNSNLSPLARFLLSRWQGQTSRDLNPS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1441 730 MobiDBLite consensus disorder prediction 459 510 - -
Lal11g1441 730 MobiDBLite consensus disorder prediction 552 583 - -
Lal11g1441 730 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1441 730 SMART serkin_6 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1441 730 MobiDBLite consensus disorder prediction 434 449 - -
Lal11g1441 730 Gene3D Transferase(Phosphotransferase) domain 1 12 301 - -
Lal11g1441 730 SUPERFAMILY Protein kinase-like (PK-like) 12 309 IPR011009 -
Lal11g1441 730 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal11g1441 730 MobiDBLite consensus disorder prediction 402 428 - -
Lal11g1441 730 MobiDBLite consensus disorder prediction 548 594 - -
Lal11g1441 730 ProSiteProfiles Protein kinase domain profile. 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1441 730 MobiDBLite consensus disorder prediction 340 359 - -
Lal11g1441 730 MobiDBLite consensus disorder prediction 360 384 - -
Lal11g1441 730 MobiDBLite consensus disorder prediction 684 706 - -
Lal11g1441 730 CDD STKc_MST3_like 13 284 - -
Lal11g1441 730 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 285 - -
Lal11g1441 730 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 315 728 - -
Lal11g1441 730 MobiDBLite consensus disorder prediction 321 522 - -
Lal11g1441 730 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 285 - -
Lal11g1441 730 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 315 728 - -
Lal11g1441 730 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1441 Lal-Chr11 17768808 17779612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1441 1 727 MAP Kinase Kinase Kinase Kinase AT3G15220 60.109 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lal11g1441 Pkinase 4.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1441 K08838 - gmx:100786501 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1441 11 17768808 17779612 Lal11g1441 11 17768808 17779612 ECH