Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1440 ATGGTGGGCTCAGGAGTAGATAGGAGCAGAGAAGCTGTAGGGATGATGGCCCTTCATGAGGCCCTCAGAACCATATGTCTTAACTCAGACTGGACTTATTCTGTTTTCTGGACCATCCGTCCGCGCCCGAGAATCAGAGGTGGTAATGGCTGCAAGGTTGGTGATGATAATGGAAGTTTGATGTTGATGTGGGAAGATGGGTTTTGTGAAGGAAGAGGTTCAGGTTGTGTTGAAGATATTGATGGAGAGGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTGGGTACTGGGTAGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCAAATATCTCCAACTATTGGCAGAGTTCCTTTGATGCTCTTCCTCCTGAATGGACTGATCAATTTGAGTCAGGGATTCAGACCATAGCTGTAATTCAAGCTGGACATGGGCTTCTGCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTATCAATCTGGTTTCTACCTCTCCCAACTATTCTCTTCAACTAGGAACAATAATTCTTCTTCTACTACTCCACTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCAATCTTCAACTGGGGTCAAAGGCCACTTGCTTCTACTAACTCTATGCTATCCTCACCAAATTTTGAACATGCTACTAGAATGGGTTTTCCACATGCCAAAGATGAGACTCAAATGTTTCTCATGCCTCATCATGCATCATCATCTGAAGACATGATGGGAGATCAACATGAACATGATATAAAATGGCCTAATGGTTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGAAGATCATCATAAGCTTTTGTTTAATCCAGATAGCTTGGGGAACAAGCAAGGTGATCATAATCATTATCATTCAGATGCATGCAACATGCATAATGGTAGTGGAACAAATCCAAATGAGTTCTTGAGCTTGGATAGTAATATTAGTCACCATAATGAAGGTGCAAAGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTACCTTCAAGAGTAGCTTCATCATCTTCATCCACTTCAATGGATCAACATCAACAACAAGGTGTAGAGTATAGGAATAATTCTGAAGGAGGCATGTACACTGATGTTATGGAAACCTTTTTGGAGTGA 1257 0.4153 MVGSGVDRSREAVGMMALHEALRTICLNSDWTYSVFWTIRPRPRIRGGNGCKVGDDNGSLMLMWEDGFCEGRGSGCVEDIDGEDPVRKAFSKMSIQLYNYGEGWVLGRLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNNNSSSTTPLPSKPSTIPIRPPPPIFNWGQRPLASTNSMLSSPNFEHATRMGFPHAKDETQMFLMPHHASSSEDMMGDQHEHDIKWPNGLSFFNALTGRTEDHHKLLFNPDSLGNKQGDHNHYHSDACNMHNGSGTNPNEFLSLDSNISHHNEGAKKMDKFKRSFTLPSRVASSSSSTSMDQHQQQGVEYRNNSEGGMYTDVMETFLE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1440 418 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 191 IPR025610 -
Lal11g1440 418 MobiDBLite consensus disorder prediction 379 405 - -
Lal11g1440 418 PANTHER GB|AAF34833.1 1 418 IPR044170 -
Lal11g1440 418 MobiDBLite consensus disorder prediction 379 403 - -
Lal11g1440 418 MobiDBLite consensus disorder prediction 210 229 - -
Lal11g1440 418 PANTHER GB|AAF34833.1 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1440 Lal-Chr11 17760060 17762493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1440 19 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.579 2.37e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1440 - - gmx:100814723 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1440 11 17760060 17762493 Lal11g1440 11 17760060 17762493 ECH